RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 CHST12Q9NRB3 414 aa8.34□□□□□ -1.07
PRPF3-205ENST00000476970 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
PRPF3-205ENST00000476970 INPP5FQ9Y2H2 1132 aa8.34□□□□□ -1.07
PRPF3-205ENST00000476970 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
PRPF3-205ENST00000476970 MAST4O15021 2626 aa8.34□□□□□ -1.07
PRPF3-205ENST00000476970 TDRD15B5MCY1 1934 aaKnown RBP8.34□□□□□ -1.07
PRPF3-205ENST00000476970 SDK1Q7Z5N4 2213 aa8.34□□□□□ -1.07
PRPF3-205ENST00000476970 C1QTNF9BB2RNN3 333 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 C2CD2LO14523 706 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TEX28O15482 410 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 GDF9O60383 454 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 LILRB3O75022 631 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 C1QTNF9P0C862 333 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 DARSP14868 501 aaKnown RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 SFPQP23246 707 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 FSHRP23945 695 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TARSP26639 723 aaKnown RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 CNR2P34972 360 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 PHKA2P46019 1235 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 CLCN3P51790 818 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 CREMQ03060 361 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 ADCY1Q08828 1119 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TRDNQ13061 729 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 MTAPQ13126 283 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TWF2Q6IBS0 349 aaKnown RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 CCDC60Q8IWA6 550 aaPredicted RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
PRPF3-205ENST00000476970 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 FGF14Q92915 247 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 PGBD4Q96DM1 585 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 FAM167AQ96KS9 214 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 MXRA8Q9BRK3 442 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TMEM175Q9BSA9 504 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 SPZ1Q9BXG8 430 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 NT5C3AQ9H0P0 336 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 PSTPIP2Q9H939 334 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 DNAJB4Q9UDY4 337 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 TCEAL9Q9UHQ7 104 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 CDH7Q9ULB5 785 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 LHX6Q9UPM6 363 aa8.33□□□□□ -1.08
PRPF3-205ENST00000476970 SALL3Q9BXA9 1300 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 HELZ2Q9BYK8 2649 aaKnown RBP8.32□□□□□ -1.08
PRPF3-205ENST00000476970 TDGF1P13385 188 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CD72P21854 359 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 GPC3P51654 580 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CDC42EP1Q00587 391 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 LRSAM1Q6UWE0 723 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 PARM1Q6UWI2 310 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 ABHD15Q6UXT9 468 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CTCFLQ8NI51 663 aaPredicted RBP8.32□□□□□ -1.08
PRPF3-205ENST00000476970 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CHRDQ9H2X0 955 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 ADAMTS10Q9H324 1103 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 RXFP1Q9HBX9 757 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.32□□□□□ -1.08
PRPF3-205ENST00000476970 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 FAN1Q9Y2M0 1017 aa8.32□□□□□ -1.08
PRPF3-205ENST00000476970 CNTNAP2Q9UHC6 1331 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 NBEAQ8NFP9 2946 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 MAN2B1O00754 1011 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 GAS2O43903 313 aaKnown RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 KCNK5O95279 499 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 ALDH2P05091 517 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 SMARCA1P28370 1054 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 TROAPQ12815 778 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 ITGB3BPQ13352 177 aaPredicted RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 GSE1Q14687 1217 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 CEP55Q53EZ4 464 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 EFCAB12Q6NXP0 572 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 DNASE1L2Q92874 299 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 LPPQ93052 612 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 LZTS2Q9BRK4 669 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 RPP25Q9BUL9 199 aaKnown RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 DSCC1Q9BVC3 393 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 GCOM2Q9BZD3 368 aaPredicted RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 INO80BQ9C086 356 aaPredicted RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 LY9Q9HBG7 655 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 PCDHA6Q9UN73 950 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 PIN4Q9Y237 131 aaKnown RBP8.31□□□□□ -1.08
PRPF3-205ENST00000476970 PCDHA8Q9Y5H6 950 aa8.31□□□□□ -1.08
PRPF3-205ENST00000476970 NAV2Q8IVL1 2488 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 SRRM3A6NNA2 597 aaPredicted RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 DDX39AO00148 427 aaKnown RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 TGM5O43548 720 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF623O75123 536 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 XYLBO75191 536 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 NR1I2O75469 434 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 OFD1O75665 1012 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms