RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 NCKAP1LP55160 1127 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 ZBED6P86452 979 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 GTF2BQ00403 316 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 CDK17Q00537 523 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 POU5F1Q01860 360 aaKnown RBP8.54□□□□□ -1.04
RBM39-230ENST00000476806 POU5F1BQ06416 359 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 NOGQ13253 232 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 KIF22Q14807 665 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 OLFML2BQ68BL8 750 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 SWSAP1Q6NVH7 229 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 LRRC55Q6ZSA7 311 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 FAM43BQ6ZT52 329 aaPredicted RBP8.54□□□□□ -1.04
RBM39-230ENST00000476806 ARMCX2Q7L311 632 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 SAPCD2Q86UD0 394 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 VPS36Q86VN1 386 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 RASAL3Q86YV0 1011 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 ZBTB8OSQ8IWT0 167 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 ANKRD13CQ8N6S4 541 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 NEK11Q8NG66 645 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 OR8K1Q8NGG5 319 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 KIAA1524Q8TCG1 905 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 BRI3BPQ8WY22 251 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
RBM39-230ENST00000476806 GLG1Q92896 1179 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 PRIMPOLQ96LW4 560 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 ZIC5Q96T25 663 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
RBM39-230ENST00000476806 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 RUSC1Q9BVN2 902 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 TSGA10Q9BZW7 698 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 KMT5AQ9NQR1 393 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 MYO1AQ9UBC5 1043 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 FBXL5Q9UKA1 691 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 FZD1Q9UP38 647 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 MAPK8IP1Q9UQF2 711 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 Q9Y3F1 56 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 PAXBP1Q9Y5B6 917 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
RBM39-230ENST00000476806 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 SMCHD1A6NHR9 2005 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 PLXNB2O15031 1838 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 LRRC37A2A6NM11 1700 aa8.54□□□□□ -1.04
RBM39-230ENST00000476806 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 TRIM49BA6NDI0 452 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 RRN3P2A6NIE6 340 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 PMM2O15305 246 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 TLR2O60603 784 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 LGR5O75473 907 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 GNRH1P01148 92 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 AFPP02771 609 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 TXNP10599 105 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 GTF2H1P32780 548 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 GJA5P36382 358 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 AP3M2P53677 418 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 TUBB4BP68371 445 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 CNTN2Q02246 1040 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 TBX2Q13207 712 aaPredicted RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 NOLC1Q14978 699 aaKnown RBP eCLIP8.53□□□□□ -1.04
RBM39-230ENST00000476806 EMC2Q15006 297 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 SURF1Q15526 300 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 ZNF792Q3KQV3 632 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 ZNF484Q5JVG2 852 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 FAM102BQ5T8I3 360 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 IER5Q5VY09 327 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 CYFIP1Q7L576 1253 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 CACNA2D4Q7Z3S7 1137 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 TRIM59Q8IWR1 403 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 DEPTORQ8TB45 409 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 ATP8B4Q8TF62 1192 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 PSPC1Q8WXF1 523 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 CALR3Q96L12 384 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 APBA2Q99767 749 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 VPS16Q9H269 839 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 DHX33Q9H6R0 707 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 SPC25Q9HBM1 224 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 PLCB1Q9NQ66 1216 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 TAB2Q9NYJ8 693 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 CEP72Q9P209 647 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 DDX41Q9UJV9 622 aaKnown RBP8.53□□□□□ -1.04
RBM39-230ENST00000476806 CAPN11Q9UMQ6 739 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 ATP8B3O60423 1300 aa8.53□□□□□ -1.04
RBM39-230ENST00000476806 A0A087WWV3 80 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 AP5Z1O43299 807 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 ZEB2O60315 1214 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 EXOC3O60645 756 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 ATP9AO75110 1047 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 PPFIA4O75335 1185 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 GFPT2O94808 682 aa8.52□□□□□ -1.05
RBM39-230ENST00000476806 CCNE2O96020 404 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms