RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SLAIN1Q8ND83 568 aa31.53■■■□□ 2.64
VEGFA-211ENST00000476772 CACTINQ8WUQ7 758 aaKnown RBP31.53■■■□□ 2.64
VEGFA-211ENST00000476772 MTG1Q9BT17 334 aaPredicted RBP31.53■■■□□ 2.64
VEGFA-211ENST00000476772 TRIM17Q9Y577 477 aa31.53■■■□□ 2.64
VEGFA-211ENST00000476772 VTNP04004 478 aa31.52■■■□□ 2.64
VEGFA-211ENST00000476772 SYCP1Q15431 976 aa31.52■■■□□ 2.64
VEGFA-211ENST00000476772 RDH13Q8NBN7 331 aa31.52■■■□□ 2.64
VEGFA-211ENST00000476772 ERGIC2Q96RQ1 377 aa31.52■■■□□ 2.64
VEGFA-211ENST00000476772 INHAP05111 366 aa31.51■■■□□ 2.64
VEGFA-211ENST00000476772 DCAF17Q5H9S7 520 aaPredicted RBP31.51■■■□□ 2.64
VEGFA-211ENST00000476772 CXCL17Q6UXB2 119 aa31.51■■■□□ 2.64
VEGFA-211ENST00000476772 POMGNT1Q8WZA1 660 aa31.51■■■□□ 2.64
VEGFA-211ENST00000476772 MAP7D2Q96T17 732 aa31.51■■■□□ 2.64
VEGFA-211ENST00000476772 PPP1R16BQ96T49 567 aa31.51■■■□□ 2.64
VEGFA-211ENST00000476772 DDX20Q9UHI6 824 aaKnown RBP31.51■■■□□ 2.64
VEGFA-211ENST00000476772 MBLAC1A4D2B0 266 aaPredicted RBP31.51■■■□□ 2.63
VEGFA-211ENST00000476772 ZEB2O60315 1214 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 PTENP60484 403 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 GOLGA8FQ08AF8 430 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 GOLGA8DPQ0D2H9 430 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 KCNH2Q12809 1159 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 LRMPQ12912 555 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 LRRC8AQ8IWT6 810 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 KIAA0319LQ8IZA0 1049 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 CCDC155Q8N6L0 562 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 CCDC150Q8NCX0 1101 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 SAAL1Q96ER3 474 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 TARS2Q9BW92 718 aaKnown RBP31.51■■■□□ 2.63
VEGFA-211ENST00000476772 PTCH2Q9Y6C5 1203 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 CENPFP49454 3210 aa31.51■■■□□ 2.63
VEGFA-211ENST00000476772 GOLGA8IPA6NC78 632 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 GOLGA8JA6NMD2 632 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 MSCO60682 206 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 PRKCBP05771 671 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 GARTP22102 1010 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 KLK7P49862 253 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 ADAM17P78536 824 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 PPP2R3AQ06190 1150 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 TCERG1LQ5VWI1 586 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 KLHDC9Q8NEP7 349 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 SLC35C1Q96A29 364 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 HDAC6Q9UBN7 1215 aa31.5■■■□□ 2.63
VEGFA-211ENST00000476772 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.5■■■□□ 2.632e-15■■■□□ 15.6
VEGFA-211ENST00000476772 GRK4P32298 578 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 MAPK6Q16659 721 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 NFKBIZQ9BYH8 718 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 IFT122Q9HBG6 1241 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 STYXL1Q9Y6J8 313 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 SCN10AQ9Y5Y9 1956 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 HTTP42858 3142 aa31.49■■■□□ 2.63
VEGFA-211ENST00000476772 A0A087WZ62 844 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 MYCNP04198 464 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 GYPCP04921 128 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 PHKA2P46019 1235 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 POU5F1BQ06416 359 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 RBL2Q08999 1139 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 PPFIBP1Q86W92 1011 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 C7orf31Q8N865 590 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 FDXACB1Q9BRP7 624 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 MINDY3Q9H8M7 445 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 C17orf102A2RUQ5 167 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 TTLL13PA6NNM8 815 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 INO80B-WBP1J3KQ70 363 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 AFPP02771 609 aaKnown RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 CYP2C9P11712 490 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 SFPQP23246 707 aaKnown RBP eCLIP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 MBTD1Q05BQ5 628 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 RUFY4Q6ZNE9 571 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 CPLX3Q8WVH0 158 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 ZBTB45Q96K62 511 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 PCMTD1Q96MG8 357 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 MRPL4Q9BYD3 311 aaKnown RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 INO80BQ9C086 356 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 FAM49AQ9H0Q0 323 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-211ENST00000476772 SIK3Q9Y2K2 1263 aa31.48■■■□□ 2.63
VEGFA-211ENST00000476772 SMIM35A0A1B0GVV1 85 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 MAPK13O15264 365 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 ADRB2P07550 413 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 CST5P28325 142 aaPredicted RBP31.47■■■□□ 2.63
VEGFA-211ENST00000476772 HOXC8P31273 242 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 GPC3P51654 580 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 ZNF200P98182 395 aaPredicted RBP31.47■■■□□ 2.63
VEGFA-211ENST00000476772 BFSP1Q12934 665 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 ZPBP2Q6X784 338 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 CBWD2Q8IUF1 395 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 HAPLN2Q9GZV7 340 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 FZD8Q9H461 694 aa31.47■■■□□ 2.63
VEGFA-211ENST00000476772 EIF2AK3Q9NZJ5 1116 aaKnown RBP31.47■■■□□ 2.63
VEGFA-211ENST00000476772 TREHO43280 583 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 ASGR1P07306 291 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 ADKP55263 362 aaKnown RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 TRIM14Q14142 442 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 KCNA10Q16322 511 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 SNRNP35Q16560 246 aaKnown RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 CCSAPQ6IQ19 270 aaPredicted RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 INTS8Q75QN2 995 aaKnown RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 IFNLR1Q8IU57 520 aaPredicted RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 TC2NQ8N9U0 490 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 FBXL18Q96ME1 805 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 ANKFY1Q9P2R3 1169 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms