RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ENTPD7Q9NQZ7 604 aa12.01□□□□□ -0.49
SEC13-214ENST00000476597 DBR1Q9UK59 544 aaKnown RBP12.01□□□□□ -0.49
SEC13-214ENST00000476597 BARX2Q9UMQ3 279 aaPredicted RBP12.01□□□□□ -0.49
SEC13-214ENST00000476597 TSPAN1O60635 241 aa12□□□□□ -0.49
SEC13-214ENST00000476597 ALADP13716 330 aa12□□□□□ -0.49
SEC13-214ENST00000476597 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
SEC13-214ENST00000476597 RPA1P27694 616 aa12□□□□□ -0.49
SEC13-214ENST00000476597 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 MBTD1Q05BQ5 628 aa12□□□□□ -0.49
SEC13-214ENST00000476597 NCBP1Q09161 790 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 GNL2Q13823 731 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 CAPSQ13938 189 aa12□□□□□ -0.49
SEC13-214ENST00000476597 RABEP1Q15276 862 aa12□□□□□ -0.49
SEC13-214ENST00000476597 AMHR2Q16671 573 aa12□□□□□ -0.49
SEC13-214ENST00000476597 TTC38Q5R3I4 469 aa12□□□□□ -0.49
SEC13-214ENST00000476597 TMEM173Q86WV6 379 aaPredicted RBP12□□□□□ -0.49
SEC13-214ENST00000476597 ZNF280BQ86YH2 543 aa12□□□□□ -0.49
SEC13-214ENST00000476597 SMG8Q8ND04 991 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 CCDC51Q96ER9 411 aa12□□□□□ -0.49
SEC13-214ENST00000476597 TMEM169Q96HH4 297 aa12□□□□□ -0.49
SEC13-214ENST00000476597 IGSF21Q96ID5 467 aa12□□□□□ -0.49
SEC13-214ENST00000476597 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
SEC13-214ENST00000476597 RSAD1Q9HA92 442 aa12□□□□□ -0.49
SEC13-214ENST00000476597 C11orf16Q9NQ32 467 aa12□□□□□ -0.49
SEC13-214ENST00000476597 INPP5FQ9Y2H2 1132 aa12□□□□□ -0.49
SEC13-214ENST00000476597 CNTNAP2Q9UHC6 1331 aa12□□□□□ -0.49
SEC13-214ENST00000476597 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 INO80B-WBP1J3KQ70 363 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 USO1O60763 962 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.49
SEC13-214ENST00000476597 DDHD2O94830 711 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 ERLIN2O94905 339 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 CXCL14O95715 111 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 ITGA4P13612 1032 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 RNASELQ05823 741 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 PDIA5Q14554 519 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 SMC1AQ14683 1233 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 VPS52Q8N1B4 723 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 EIF2AQ9BY44 585 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 POLR3FQ9H1D9 316 aaPredicted RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 USP15Q9Y4E8 981 aaPredicted RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 IPPQ9Y573 584 aa11.99□□□□□ -0.49
SEC13-214ENST00000476597 FNDC1Q4ZHG4 1894 aaPredicted RBP11.99□□□□□ -0.49
SEC13-214ENST00000476597 WDR81Q562E7 1941 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 A0A1B0GUA9 196 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 INPPL1O15357 1258 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 DCXO43602 365 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 B4GALT3O60512 393 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
SEC13-214ENST00000476597 ALDH2P05091 517 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 ARF4P18085 180 aaPredicted RBP11.98□□□□□ -0.49
SEC13-214ENST00000476597 MUTP22033 750 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 SLC11A1P49279 550 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
SEC13-214ENST00000476597 NBR1Q14596 966 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
SEC13-214ENST00000476597 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 SYCE2Q6PIF2 218 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 URGCPQ8TCY9 931 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 BCL7CQ8WUZ0 217 aaPredicted RBP11.98□□□□□ -0.49
SEC13-214ENST00000476597 SUSD6Q92537 303 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 CPB2Q96IY4 423 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 TMEM175Q9BSA9 504 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 GBP3Q9H0R5 595 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 ZBP1Q9H171 429 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 GPRC5CQ9NQ84 441 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 IRAK3Q9Y616 596 aa11.98□□□□□ -0.49
SEC13-214ENST00000476597 B4GALT5O43286 388 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 ST18O60284 1047 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 POMCP01189 267 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 SRGAP2BP0DMP2 458 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 CTSAP10619 480 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 HOXB8P17481 243 aaPredicted RBP11.97□□□□□ -0.49
SEC13-214ENST00000476597 CYP11B2P19099 503 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 PTGDRQ13258 359 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 GIT2Q14161 759 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 CBX2Q14781 532 aaPredicted RBP11.97□□□□□ -0.49
SEC13-214ENST00000476597 ECM1Q16610 540 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 LLGL2Q6P1M3 1020 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 RNF135Q8IUD6 432 aa11.97□□□□□ -0.49
SEC13-214ENST00000476597 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms