RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 IFT122Q9HBG6 1241 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 G3BP2Q9UN86 482 aaKnown RBP6.61□□□□□ -1.35
PTCD3-211ENST00000476215 DAPK3O43293 454 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA12O60330 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 SEC24DO94855 1032 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 FSBPO95073 299 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 SNUPNO95149 360 aaKnown RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 TNFRSF1AP19438 455 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 AGXTP21549 392 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 MCL1Q07820 350 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 MGAT5Q09328 741 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 DUSP8Q13202 625 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 ZNF568Q3ZCX4 644 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 AGBL4Q5VU57 503 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 CHST13Q8NET6 341 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 JDP2Q8WYK2 163 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 HOOK2Q96ED9 719 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 NEIL1Q96FI4 390 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 SLC2A13Q96QE2 648 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 ACE2Q9BYF1 805 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 ST6GALNAC2Q9UJ37 374 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA9Q9Y5G4 932 aaKnown RBP6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA8Q9Y5G5 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA7Q9Y5G6 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA6Q9Y5G7 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA3Q9Y5H0 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 PCDHGA2Q9Y5H1 932 aa6.6□□□□□ -1.35
PTCD3-211ENST00000476215 SELENOPP49908 381 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 EPHB1P54762 984 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 KRT85P78386 507 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 CD69Q07108 199 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 Q8TCH9 128 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 JADE3Q92613 823 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 GCDHQ92947 438 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-211ENST00000476215 LMF1Q96S06 567 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 CDK5RAP1Q96SZ6 601 aaKnown RBP6.59□□□□□ -1.35
PTCD3-211ENST00000476215 KLC2Q9H0B6 622 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 METTL14Q9HCE5 456 aaKnown RBP6.59□□□□□ -1.35
PTCD3-211ENST00000476215 LUC7L2Q9Y383 392 aaKnown RBP6.59□□□□□ -1.35
PTCD3-211ENST00000476215 TESMINQ9Y4I5 508 aa6.59□□□□□ -1.35
PTCD3-211ENST00000476215 PMS2P1A4D2B8 440 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 MATN2O00339 956 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 MATN3O15232 486 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 ZNF623O75123 536 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 LY86O95711 162 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 INSRRP14616 1297 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 ODF1Q14990 250 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 EFCAB2Q5VUJ9 269 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 MBNL2Q5VZF2 373 aaKnown RBP6.58□□□□□ -1.36
PTCD3-211ENST00000476215 TCTN3Q6NUS6 607 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 PPM1NQ8N819 430 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 OR14K1Q8NGZ2 314 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 PPP1R14CQ8TAE6 165 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 CFHR4Q92496 578 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 FATE1Q969F0 183 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 TEKT5Q96M29 485 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 UIMC1Q96RL1 719 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 JADE2Q9NQC1 790 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 ZNF277Q9NRM2 450 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-211ENST00000476215 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 NR2E1Q9Y466 385 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 RBM8AQ9Y5S9 174 aaKnown RBP6.58□□□□□ -1.36
PTCD3-211ENST00000476215 SLC30A1Q9Y6M5 507 aa6.58□□□□□ -1.36
PTCD3-211ENST00000476215 ARHGAP6O43182 974 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 FOXS1O43638 330 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 GAAP10253 952 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 RECQLP46063 649 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-211ENST00000476215 RAB27AP51159 221 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 RAC3P60763 192 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 TBR1Q16650 682 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 ANO4Q32M45 955 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 CLEC14AQ86T13 490 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 RAVER1Q8IY67 606 aaKnown RBP6.57□□□□□ -1.36
PTCD3-211ENST00000476215 PLA2G15Q8NCC3 412 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 GLB1L3Q8NCI6 653 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-211ENST00000476215 OAZ3Q9UMX2 235 aa6.57□□□□□ -1.36
PTCD3-211ENST00000476215 CTDP1Q9Y5B0 961 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-211ENST00000476215 C2orf78A6NCI8 922 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 AKAP10O43572 662 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 NDUFS2O75306 463 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-211ENST00000476215 HGFACQ04756 655 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 TCIRG1Q13488 830 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 PIN1Q13526 163 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-211ENST00000476215 ADRM1Q16186 407 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 MUM1L1Q5H9M0 696 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 BTNL9Q6UXG8 535 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 UNC5BQ8IZJ1 945 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 PIK3C3Q8NEB9 887 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 LPPQ93052 612 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 SLC7A6OSQ96CW6 309 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-211ENST00000476215 GNRHR2Q96P88 292 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms