RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 BDP1A6H8Y1 2624 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 NCLP19338 710 aaKnown RBP23.43■■□□□ 1.34
LIME1-204ENST00000476183 KCNA5P22460 613 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 AFF1P51825 1210 aaKnown RBP23.43■■□□□ 1.34
LIME1-204ENST00000476183 UBE3AQ05086 875 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 ZRSR1Q15695 479 aaKnown RBP23.43■■□□□ 1.34
LIME1-204ENST00000476183 NOMO2Q5JPE7 1267 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 HYIQ5T013 277 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 NOTUMQ6P988 496 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 GLB1LQ6UWU2 654 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 SNX21Q969T3 373 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 PGBD4Q96DM1 585 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 CCDC51Q96ER9 411 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 CSRNP2Q9H175 543 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 RNF39Q9H2S5 420 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 TBC1D13Q9NVG8 400 aa23.43■■□□□ 1.34
LIME1-204ENST00000476183 ERVFC1P60507 584 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 PLCB3Q01970 1234 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 RESTQ13127 1097 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 SF3A1Q15459 793 aaKnown RBP23.42■■□□□ 1.34
LIME1-204ENST00000476183 CDR2LQ86X02 465 aaPredicted RBP23.42■■□□□ 1.34
LIME1-204ENST00000476183 ADAMTS19Q8TE59 1207 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 PABPC5Q96DU9 382 aaKnown RBP23.42■■□□□ 1.34
LIME1-204ENST00000476183 RUSC1Q9BVN2 902 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 FZD8Q9H461 694 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 HES2Q9Y543 173 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 IPPQ9Y573 584 aa23.42■■□□□ 1.34
LIME1-204ENST00000476183 TTLL13PA6NNM8 815 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 B4GALT3O60512 393 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 BCAR1P56945 870 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 GRIN1Q05586 938 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 CTC1Q2NKJ3 1217 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 PPP4R3CPQ6ZMV5 832 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 ZBTB8OSQ8IWT0 167 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 SLC39A11Q8N1S5 342 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 RSPH1Q8WYR4 309 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 MRPS27Q92552 414 aaKnown RBP23.41■■□□□ 1.34
LIME1-204ENST00000476183 PLIN2Q99541 437 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 KIFC3Q9BVG8 833 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 NRDE2Q9H7Z3 1164 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 RSAD1Q9HA92 442 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 TLR9Q9NR96 1032 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 SPG21Q9NZD8 308 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 MTMR6Q9Y217 621 aa23.41■■□□□ 1.34
LIME1-204ENST00000476183 A0A1B0GUA9 196 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 NT5C1B-RDH14C9J2C7 533 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 FSCN2O14926 492 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 EDN1P05305 212 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 LTBRP36941 435 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 NAMPTP43490 491 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 NCBP1Q09161 790 aaKnown RBP23.4■■□□□ 1.34
LIME1-204ENST00000476183 FAM187BQ17R55 369 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 LEXMQ3ZCV2 418 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 RINT1Q6NUQ1 792 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 FAM173BQ6P4H8 233 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 C1orf186Q6ZWK4 172 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 TMEM173Q86WV6 379 aaPredicted RBP23.4■■□□□ 1.34
LIME1-204ENST00000476183 DAW1Q8N136 415 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 KIFAP3Q92845 792 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 NECAB3Q96P71 396 aaPredicted RBP23.4■■□□□ 1.34
LIME1-204ENST00000476183 CCDC113Q9H0I3 377 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 C2orf40Q9H1Z8 148 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 IGFLR1Q9H665 355 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 PRMT7Q9NVM4 692 aaPredicted RBP23.4■■□□□ 1.34
LIME1-204ENST00000476183 CLDND1Q9NY35 253 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 LZTS1Q9Y250 596 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 USP20Q9Y2K6 914 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
LIME1-204ENST00000476183 CNTNAP2Q9UHC6 1331 aa23.39■■□□□ 1.34
LIME1-204ENST00000476183 H3BQ06 376 aaPredicted RBP23.39■■□□□ 1.33
LIME1-204ENST00000476183 LINC01565O15544 149 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 ZC3H11AO75152 810 aaKnown RBP eCLIP23.39■■□□□ 1.33
LIME1-204ENST00000476183 BMP15O95972 392 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 ITGA4P13612 1032 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 PPM1AP35813 382 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 TMEM119Q4V9L6 283 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 EP400NLQ6ZTU2 488 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 ZNF280BQ86YH2 543 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 CNNM3Q8NE01 707 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.39■■□□□ 1.33
LIME1-204ENST00000476183 DEPTORQ8TB45 409 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 PRIMPOLQ96LW4 560 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 NXF3Q9H4D5 531 aaKnown RBP23.39■■□□□ 1.33
LIME1-204ENST00000476183 DNAJB4Q9UDY4 337 aa23.39■■□□□ 1.33
LIME1-204ENST00000476183 NCK2O43639 380 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 HIP1RO75146 1068 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 DDHD2O94830 711 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 NPTXRO95502 500 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 DLX2Q07687 328 aaPredicted RBP23.38■■□□□ 1.33
LIME1-204ENST00000476183 MAPK7Q13164 816 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 PPP2R5AQ15172 486 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 PTPAQ15257 358 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 SLC27A1Q6PCB7 646 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 CABP7Q86V35 215 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 MICAL1Q8TDZ2 1067 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 LRRC15Q8TF66 581 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 IFT74Q96LB3 600 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 AK8Q96MA6 479 aa23.38■■□□□ 1.33
LIME1-204ENST00000476183 UHRF1Q96T88 793 aaPredicted RBP23.38■■□□□ 1.33
LIME1-204ENST00000476183 GBP3Q9H0R5 595 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms