RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 RGS20O76081 388 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 OAZ1P54368 228 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 GLE1Q53GS7 698 aaKnown RBP17.31■□□□□ 0.36
VARS2-207ENST00000476162 FAM71BQ8TC56 605 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 NSUN6Q8TEA1 469 aaKnown RBP17.31■□□□□ 0.36
VARS2-207ENST00000476162 IWS1Q96ST2 819 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 TELO2Q9Y4R8 837 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
VARS2-207ENST00000476162 MAFGO15525 162 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 ZNF862O60290 1169 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 KCNA2P16389 499 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 NPTX2P47972 431 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 AARSP49588 968 aaKnown RBP eCLIP17.31■□□□□ 0.36
VARS2-207ENST00000476162 SATB1Q01826 763 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 CETN1Q12798 172 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 SLFN11Q7Z7L1 901 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 APOBEC3FQ8IUX4 373 aaKnown RBP17.31■□□□□ 0.36
VARS2-207ENST00000476162 ARHGEF19Q8IW93 802 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 RDM1Q8NG50 284 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 PARP14Q460N5 1801 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 CES2O00748 559 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SYF2O95926 243 aaKnown RBP17.3■□□□□ 0.36
VARS2-207ENST00000476162 GLI1P08151 1106 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 TNFAIP3P21580 790 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 RFX1P22670 979 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 ADSSP30520 456 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SMTNP53814 917 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SOX10P56693 466 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SP4Q02446 784 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 EPC2Q52LR7 807 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
VARS2-207ENST00000476162 PEX26Q7Z412 305 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 DAAM2Q86T65 1068 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 FMNL3Q8IVF7 1028 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 KRT12Q99456 494 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 PLEKHA4Q9H4M7 779 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 SEPT11Q9NVA2 429 aaKnown RBP17.3■□□□□ 0.36
VARS2-207ENST00000476162 DAAM1Q9Y4D1 1078 aa17.3■□□□□ 0.36
VARS2-207ENST00000476162 P4HA2O15460 535 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 PPFIA4O75335 1185 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 ADRB2P07550 413 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 ABCB4P21439 1286 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 SNRPFP62306 86 aaKnown RBP17.29■□□□□ 0.36
VARS2-207ENST00000476162 DMP1Q13316 513 aaPredicted RBP17.29■□□□□ 0.36
VARS2-207ENST00000476162 KIF22Q14807 665 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 PALB2Q86YC2 1186 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 SLC17A8Q8NDX2 589 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
VARS2-207ENST00000476162 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 TAS2R14Q9NYV8 317 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 RLFQ13129 1914 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 MAPK13O15264 365 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 CEP104O60308 925 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 METTL13Q8N6R0 699 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 SLC35G2Q8TBE7 412 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 BSNDQ8WZ55 320 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 SAAL1Q96ER3 474 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 PBKQ96KB5 322 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 TMEM117Q9H0C3 514 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 STXBP5LQ9Y2K9 1186 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
VARS2-207ENST00000476162 COL11A1P12107 1806 aaPredicted RBP17.29■□□□□ 0.36
VARS2-207ENST00000476162 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 SORBS3O60504 671 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 STBD1O95210 358 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 TMEM253P0C7T8 217 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 ZBTB48P10074 688 aaPredicted RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 CNGA1P29973 690 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 MAP4K3Q8IVH8 894 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 MICALL1Q8N3F8 863 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 RIN2Q8WYP3 895 aaPredicted RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 ATP6V0A1Q93050 837 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.364e-6■■■■■ 47.7
VARS2-207ENST00000476162 TMEM59LQ9UK28 342 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 ATP2A1O14983 1001 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 TNFRSF8P28908 595 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 GGCXP38435 758 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms