RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 DCAF4Q8WV16 495 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 OSBP2Q969R2 916 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 MKL1Q969V6 931 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 CEP95Q96GE4 821 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 TOX2Q96NM4 488 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 MAF1Q9H063 256 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ABHD16BQ9H3Z7 469 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 PRDM5Q9NQX1 630 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 HELLSQ9NRZ9 838 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 SEMA3GQ9NS98 782 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 STAP2Q9UGK3 403 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ADAM30Q9UKF2 790 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 VCANP13611 3396 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 DNAJC25-GNG10A0A024R161 153 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CYP2D7A0A087X1C5 515 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 PRAMEF27A3QJZ7 478 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 FAM221AA4D161 298 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ASB14A6NK59 587 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 TSPY2A6NKD2 308 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 MINDY4BA8MYZ0 360 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 F5H6K3 240 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 M0R2C6 588 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 HIP1O00291 1037 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 PEX10O60683 326 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 DUSP11O75319 330 aaKnown RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CABYRO75952 493 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 BAG4O95429 457 aaKnown RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CLTBP09497 229 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 TCF3P15923 654 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 PTMSP20962 102 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SLC1A4P43007 532 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 RPL6Q02878 288 aaKnown RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 KLRC3Q07444 240 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 IKQ13123 557 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 PSMD2Q13200 908 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ALX1Q15699 326 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 TSNAXIP1Q2TAA8 658 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SKOR2Q2VWA4 1001 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC178Q5BJE1 867 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 KIAA1755Q5JYT7 1200 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SLFN13Q68D06 897 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ZNF746Q6NUN9 644 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SLC23A3Q6PIS1 610 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SIAH1Q8IUQ4 282 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 IFNL3Q8IZI9 196 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ANKRD35Q8N283 1001 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 TRPV1Q8NER1 839 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ASB11Q8WXH4 323 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 DDX11Q96FC9 970 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ASIC4Q96FT7 647 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SENP6Q9GZR1 1112 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 UPF3AQ9H1J1 476 aaKnown RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 MIR1-1HGQ9H1L0 117 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 MTIF3Q9H2K0 278 aaKnown RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 RNF41Q9H4P4 317 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 GRPEL1Q9HAV7 217 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 PDLIM7Q9NR12 457 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 FBXO28Q9NVF7 368 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 TJP2Q9UDY2 1190 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 FAM184BQ9ULE4 1060 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 STXBP5LQ9Y2K9 1186 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ST14Q9Y5Y6 855 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CAPN6Q9Y6Q1 641 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-206ENST00000476045 ELP1O95163 1332 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC171Q6TFL3 1326 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 WDR19Q8NEZ3 1342 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 RAD50Q92878 1312 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 SYNRGQ9UMZ2 1314 aa4.89□□□□□ -1.63
VPS13D-206ENST00000476045 A0A0U1RQG5 324 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 A0A1W2PQ45 241 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 A0A1W2PQY0 241 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 B4DLN1 442 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 GOLGA6L22H0YM25 854 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 KIAA0355O15063 1070 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 TLR3O15455 904 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ZEB2O60315 1214 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 CILPO75339 1184 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 SYN1P17600 705 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ITIH2P19823 946 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 CD96P40200 585 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 NOVP48745 357 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 MRPL12P52815 198 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 NKX3-2P78367 333 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 SMAD3P84022 425 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 LMNB2Q03252 620 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 TRIM60Q495X7 471 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM201Q5SNT2 666 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 GPATCH4Q5T3I0 446 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 GJC2Q5T442 439 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 PRAMEF13Q5VWM6 474 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 PSRC1Q6PGN9 363 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 SLC39A5Q6ZMH5 540 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms