RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 H0Y858 1186 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 EML1O00423 815 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 TBX3O15119 743 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 CDKL5O76039 1030 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 ALDH2P05091 517 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 ASGR2P07307 311 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 KLRC2P26717 231 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 NPEPPSP55786 919 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 STK3Q13188 491 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 TMC5Q6UXY8 1006 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 OTUD6AQ7L8S5 288 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
CDRT1-205ENST00000475944 GPR149Q86SP6 731 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 ZNF280BQ86YH2 543 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 CNNM3Q8NE01 707 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
CDRT1-205ENST00000475944 AIFM3Q96NN9 605 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 NAP1L4Q99733 375 aaKnown RBP12.11□□□□□ -0.47
CDRT1-205ENST00000475944 TM6SF1Q9BZW5 370 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 MFSD1Q9H3U5 465 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 UBN1Q9NPG3 1134 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 FAN1Q9Y2M0 1017 aa12.11□□□□□ -0.47
CDRT1-205ENST00000475944 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 ASAP2O43150 1006 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 MARCH6O60337 910 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 DDHD2O94830 711 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 ERLIN2O94905 339 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 CLCN4P51793 760 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 PCBP1Q15365 356 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 EPHA7Q15375 998 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 C15orf39Q6ZRI6 1047 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 RNF149Q8NC42 400 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 KLHL5Q96PQ7 755 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 LXNQ9BS40 222 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 VN1R3Q9BXE9 311 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 SMOC2Q9H3U7 446 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 WRAP73Q9P2S5 460 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-205ENST00000475944 KCNJ14Q9UNX9 436 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
CDRT1-205ENST00000475944 NRP1O14786 923 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 B4GALT3O60512 393 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 SOD2P04179 222 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 URODP06132 367 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 AXLP30530 894 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 CLCN5P51795 746 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 EMC2Q15006 297 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 UBXN11Q5T124 520 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 ELMSAN1Q6PJG2 1045 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 TMEM105Q8N8V8 129 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 MTRQ99707 1265 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 MINDY3Q9H8M7 445 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-205ENST00000475944 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 STK36Q9NRP7 1315 aa12.09□□□□□ -0.47
CDRT1-205ENST00000475944 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 LILRB3O75022 631 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 NR1I2O75469 434 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.48
CDRT1-205ENST00000475944 POMCP01189 267 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 ADH1AP07327 375 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 ITGA4P13612 1032 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 OR1G1P47890 313 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
CDRT1-205ENST00000475944 AK2P54819 239 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 SCRN1Q12765 414 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-205ENST00000475944 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 NCAPH2Q6IBW4 605 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 SLFN12Q8IYM2 578 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 HAS1Q92839 578 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 DYDC2Q96IM9 177 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms