RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	HECW2	Q9P2P5	1572 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835		A0A088AWK7	358 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8IP	A6NC78	632 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SPDYE16	A6NNV3	312 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835		B8ZZF3	427 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835		H0Y626	953 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	UBXN8	O00124	270 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SGK1	O00141	431 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	KRIT1	O00522	736 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	VWA5A	O00534	786 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	N4BP3	O15049	544 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	HDAC3	O15379	428 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	POLR2D	O15514	142 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ACSL4	O60488	711 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MAF	O75444	373 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	NR1I2	O75469	434 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DGKI	O75912	1065 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MICAL2	O94851	1124 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FARP2	O94887	1054 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CSPG5	O95196	566 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CD2BP2	O95400	341 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CHRNA1	P02708	482 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT1	P04264	644 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	IFIT2	P09913	472 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	PRKAR1A	P10644	381 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CHRNB1	P11230	501 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CSF2RA	P15509	400 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ATF3	P18847	181 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	POLR2C	P19387	275 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MX2	P20592	715 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	JAK1	P23458	1154 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CRABP2	P29373	138 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	PTGS2	P35354	604 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ADCY8	P40145	1251 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	HTR3A	P46098	478 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	RGS7	P49802	495 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SCNN1D	P51172	638 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	AP3M2	P53677	418 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	EIF4A1	P60842	406 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SRP54	P61011	504 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	VBP1	P61758	197 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	USP46	P62068	366 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GSTO1	P78417	241 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TMPRSS15	P98073	1019 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DNM1	Q05193	864 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GFPT1	Q06210	699 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TBL3	Q12788	808 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SMARCB1	Q12824	385 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	XRCC4	Q13426	336 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DHX34	Q14147	1143 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FRG1	Q14331	258 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DSC3	Q14574	896 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MVP	Q14764	893 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CASP8	Q14790	479 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TSC22D1	Q15714	1073 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	PCSK7	Q16549	785 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	KLHL38	Q2WGJ6	581 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SGO2	Q562F6	1265 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	IGSF11	Q5DX21	431 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	HABP4	Q5JVS0	413 aa	Known RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CCNJ	Q5T5M9	372 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SYDE2	Q5VT97	1194 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DAB2IP	Q5VWQ8	1189 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP2R2D	Q66LE6	453 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM180B	Q6P0A1	224 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM122C	Q6P4D5	195 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FOXR1	Q6PIV2	292 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	POMZP3	Q6PJE2	187 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC30A10	Q6XR72	485 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	B3GNT6	Q6ZMB0	384 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ANO5	Q75V66	913 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GALNT5	Q7Z7M9	940 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC9B2	Q86UD5	537 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GPIHBP1	Q8IV16	184 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	PASD1	Q8IV76	773 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TRIM22	Q8IYM9	498 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	FUK	Q8N0W3	1084 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TAB3	Q8N5C8	712 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	DNAAF3	Q8N9W5	541 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CCDC63	Q8NA47	563 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	GALNT11	Q8NCW6	608 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF540	Q8NDQ6	660 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MGARP	Q8TDB4	240 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	OSCP1	Q8WVF1	389 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	JPH3	Q8WXH2	748 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ANKS1A	Q92625	1134 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	NXPE3	Q969Y0	559 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	RNF25	Q96BH1	459 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	IFT43	Q96FT9	208 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	EGLN2	Q96KS0	407 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	ATP6V1G3	Q96LB4	118 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	MFSD14A	Q96MC6	490 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SLF1	Q9BQI6	1058 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SDF4	Q9BRK5	362 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	SIKE1	Q9BRV8	207 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	TIPIN	Q9BVW5	301 aa		4.12	□□□□□ -1.75
LSM2-211	ENST00000475835	LSM14B	Q9BX40	385 aa	Known RBP	4.12	□□□□□ -1.75

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