RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 CSDE1O75534 798 aaKnown RBP16.5■□□□□ 0.23
TRIM11-203ENST00000475775 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
TRIM11-203ENST00000475775 ITIH3Q06033 890 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 OTUD6AQ7L8S5 288 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 URGCPQ8TCY9 931 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 TCP11Q8WWU5 503 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 SH2D3AQ9BRG2 576 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 UPF2Q9HAU5 1272 aaKnown RBP16.5■□□□□ 0.23
TRIM11-203ENST00000475775 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 HCFC2Q9Y5Z7 792 aa16.5■□□□□ 0.23
TRIM11-203ENST00000475775 CEP250Q9BV73 2442 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 C2orf71A6NGG8 1288 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 ZNF623O75123 536 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
TRIM11-203ENST00000475775 LARGE1O95461 756 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 CLCN5P51795 746 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 NEK4P51957 841 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 EPHA7Q15375 998 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 NOMO2Q5JPE7 1267 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 PIK3AP1Q6ZUJ8 805 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 LXNQ9BS40 222 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 DZANK1Q9NVP4 752 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 NCOR2Q9Y618 2525 aa16.49■□□□□ 0.23
TRIM11-203ENST00000475775 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.48■□□□□ 0.23
TRIM11-203ENST00000475775 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 EML1O00423 815 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 ASAP2O43150 1006 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
TRIM11-203ENST00000475775 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRIM11-203ENST00000475775 ME3Q16798 604 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 VPS52Q8N1B4 723 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 ZBP1Q9H171 429 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 DHX33Q9H6R0 707 aaKnown RBP16.48■□□□□ 0.23
TRIM11-203ENST00000475775 TBC1D13Q9NVG8 400 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 IRAK3Q9Y616 596 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
TRIM11-203ENST00000475775 NT5C1B-RDH14C9J2C7 533 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 DTNBO60941 627 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 ERLIN2O94905 339 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 CTSAP10619 480 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 KRT2P35908 639 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 MTHFRP42898 656 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 DDX53Q86TM3 631 aaKnown RBP16.47■□□□□ 0.23
TRIM11-203ENST00000475775 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 KSR1Q8IVT5 923 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 RMDN1Q96DB5 314 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 IGSF21Q96ID5 467 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 KIF2CQ99661 725 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 POMKQ9H5K3 350 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 UBN1Q9NPG3 1134 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
TRIM11-203ENST00000475775 KMT2BQ9UMN6 2715 aaPredicted RBP16.47■□□□□ 0.23
TRIM11-203ENST00000475775 CLASP2O75122 1294 aaKnown RBP16.46■□□□□ 0.23
TRIM11-203ENST00000475775 OFD1O75665 1012 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 CXCL14O95715 111 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 ASGR2P07307 311 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 NPEPPSP55786 919 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 NCBP1Q09161 790 aaKnown RBP16.46■□□□□ 0.23
TRIM11-203ENST00000475775 EMC2Q15006 297 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 DGLUCYQ7Z3D6 616 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 FLCNQ8NFG4 579 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 LPPQ93052 612 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
TRIM11-203ENST00000475775 FAM193BQ96PV7 902 aaPredicted RBP16.46■□□□□ 0.23
TRIM11-203ENST00000475775 MTRQ99707 1265 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 NRDE2Q9H7Z3 1164 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 RSAD1Q9HA92 442 aa16.46■□□□□ 0.23
TRIM11-203ENST00000475775 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.23
TRIM11-203ENST00000475775 KRT37O76014 449 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 GALTP07902 379 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 TFDP1Q14186 410 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 MXD4Q14582 209 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-203ENST00000475775 LONRF3Q496Y0 759 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 RNF149Q8NC42 400 aa16.45■□□□□ 0.22
TRIM11-203ENST00000475775 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
TRIM11-203ENST00000475775 HAS1Q92839 578 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms