RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 LXNQ9BS40 222 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 DKC1O60832 514 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 PRPHP41219 470 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 POLGP54098 1239 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 BCAR1P56945 870 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 KRT17Q04695 432 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 COASYQ13057 564 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 DUSP6Q16828 381 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 LRRC43Q8N309 656 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 ZNF558Q96NG5 402 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 HSD17B14Q9BPX1 270 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 TRAIPQ9BWF2 469 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 PIN4Q9Y237 131 aaKnown RBP13.17□□□□□ -0.3
CLIP2-204ENST00000474962 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
CLIP2-204ENST00000474962 OFD1O75665 1012 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 ALADP13716 330 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-204ENST00000474962 RFC5P40937 340 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
CLIP2-204ENST00000474962 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
CLIP2-204ENST00000474962 KRT85P78386 507 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 PDIA5Q14554 519 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 PDE12Q6L8Q7 609 aaKnown RBP13.16□□□□□ -0.3
CLIP2-204ENST00000474962 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 SLC39A11Q8N1S5 342 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 C4orf32Q8N8J7 132 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
CLIP2-204ENST00000474962 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 LRWD1Q9UFC0 647 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
CLIP2-204ENST00000474962 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 DCXO43602 365 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 ZNF623O75123 536 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 CXCL14O95715 111 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 KCNC3Q14003 757 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 EMC2Q15006 297 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 TMEM173Q86WV6 379 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 APOL5Q9BWW9 433 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
CLIP2-204ENST00000474962 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-204ENST00000474962 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 POTEMA6NI47 508 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 SPTLC2O15270 562 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 ASAP2O43150 1006 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLIP2-204ENST00000474962 SKIP12755 728 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 PPM1AP35813 382 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 NASPP49321 788 aaPredicted RBP13.14□□□□□ -0.31
CLIP2-204ENST00000474962 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 GLB1LQ6UWU2 654 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
CLIP2-204ENST00000474962 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
CLIP2-204ENST00000474962 CDCA3Q99618 268 aaPredicted RBP13.14□□□□□ -0.31
CLIP2-204ENST00000474962 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms