RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ABCD1P33897 745 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ATP1A2P50993 1020 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GEMIN4P57678 1058 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 MAGOHP61326 146 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 PTP4A2Q12974 167 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 EPHA7Q15375 998 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 KHDC1Q4VXA5 237 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 LIN52Q52LA3 116 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 AKNAD1Q5T1N1 836 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SYCP2LQ5T4T6 812 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SYDE2Q5VT97 1194 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 FAM171BQ6P995 826 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 DDX42Q86XP3 938 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP16-205ENST00000474835 LNX1Q8TBB1 728 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 TANKQ92844 425 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 MAGOHBQ96A72 148 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 PLCD4Q9BRC7 762 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ERP44Q9BS26 406 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 TANGO6Q9C0B7 1094 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CARD9Q9H257 536 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ZNF385DQ9H6B1 395 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 RMND1Q9NWS8 449 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GUCA1BQ9UMX6 200 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ZNF652Q9Y2D9 606 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PLXNB2O15031 1838 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 WDR90Q96KV7 1748 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 A0A087X0T9 212 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GOLGA6L10A0A0M3HER8 536 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GOLGA6L10A6NI86 522 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ANKRD63C9JTQ0 380 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 F5H6K3 240 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 EDF1O60869 148 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 TBX10O75333 385 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 DDAH1O94760 285 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ITGA2BP08514 1039 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 FAM228BP0C875 321 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 KLRC2P26717 231 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ADORA1P30542 326 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 METAP2P50579 478 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP16-205ENST00000474835 LIMK1P53667 647 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 LRRC63Q05C16 580 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 STK4Q13043 487 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GRB10Q13322 594 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CUL3Q13618 768 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SLC15A2Q16348 729 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 TAZQ16635 292 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CCDC152Q4G0S7 254 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ACSBG2Q5FVE4 666 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 OGFRL1Q5TC84 451 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 KCTD16Q68DU8 428 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ZNF571Q7Z3V5 609 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 PPFIBP1Q86W92 1011 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PRELID2Q8N945 189 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 MDM1Q8TC05 714 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 NAT14Q8WUY8 206 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SPIRE2Q8WWL2 714 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 AK8Q96MA6 479 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 DCLRE1BQ9H816 532 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PLAC1Q9HBJ0 212 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SAP30BPQ9UHR5 308 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 COG5Q9UP83 839 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PCDHB2Q9Y5E7 798 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SBF1O95248 1867 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 DDX3XO00571 662 aaKnown RBP eCLIP4.43□□□□□ -1.73e-11■■■■■ 50.4
USP16-205ENST00000474835 GRIN3BO60391 1043 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 DKC1O60832 514 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP16-205ENST00000474835 PDGFRBP09619 1106 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PORP16435 677 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 SPIRE1Q08AE8 756 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 C8orf74Q6P047 294 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 FBXL19Q6PCT2 694 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CHST3Q7LGC8 479 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TXNDC2Q86VQ3 553 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CYP4X1Q8N118 509 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ZNF513Q8N8E2 541 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 OPTNQ96CV9 577 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TBC1D10AQ9BXI6 508 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PACSIN1Q9BY11 444 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 KLHL14Q9P2G3 628 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 VPS28Q9UK41 221 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PNMA2Q9UL42 364 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TRAF3IP3Q9Y228 551 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CEPT1Q9Y6K0 416 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ESYT2A0FGR8 921 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 GCOM1H8Y6P7 765 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 SULT1C4O75897 302 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 MYZAPP0CAP1 466 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PHKA1P46020 1223 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 RTP1P59025 263 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CYP27A1Q02318 531 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 KIF22Q14807 665 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 MAN2A1Q16706 1144 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 MYLK3Q32MK0 819 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TEX44Q53QW1 395 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CHRDL2Q6WN34 429 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 NLRX1Q86UT6 975 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PASD1Q8IV76 773 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 FANCBQ8NB91 859 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms