RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, human

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIKFYVE-208	ENST00000474721	XPA	P23025	273 aa	Predicted RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CASR	P41180	1078 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	WNT3A	P56704	352 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ZNF460	Q14592	562 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	VPS72	Q15906	364 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CFAP100	Q494V2	611 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ESRP1	Q6NXG1	681 aa	Known RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	UNQ6494/PRO21346	Q6UXR6	183 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CXorf67	Q86X51	503 aa	Predicted RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PASD1	Q8IV76	773 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	UNC5B	Q8IZJ1	945 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LILRB2	Q8N423	598 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	RTF1	Q92541	710 aa	Known RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	MYEOV	Q96EZ4	313 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ZNF764	Q96H86	408 aa	Predicted RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	DCLRE1C	Q96SD1	692 aa	Known RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	SOX7	Q9BT81	388 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NDC1	Q9BTX1	674 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	IFT57	Q9NWB7	429 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CLCA2	Q9UQC9	943 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ST20-MTHFS	A0A0A6YYL1	179 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	RNASET2	O00584	256 aa	Known RBP	4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	DNAJC8	O75937	253 aa	Predicted RBP	4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	HSP90B1	P14625	803 aa	Known RBP	4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CD40	P25942	277 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CD38	P28907	300 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	SYCE2	Q6PIF2	218 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	OLFML1	Q6UWY5	402 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PRIMA1	Q86XR5	153 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ADGRG3	Q86Y34	549 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LCORL	Q8N3X6	602 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	OR52N2	Q8NGI0	321 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	IL17RA	Q96F46	866 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ENKD1	Q9H0I2	346 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ZNF768	Q9H5H4	540 aa	Known RBP	4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	OXSM	Q9NWU1	459 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	TRPM5	Q9NZQ8	1165 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PCDHB6	Q9Y5E3	794 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	MYPN	Q86TC9	1320 aa		4.89	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CENPVL1	A0A0U1RR11	272 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PRR5-ARHGAP8	B1AHC4	643 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GAS7	O60861	476 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	AVPR1B	P47901	424 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GZMK	P49863	264 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	DUSP2	Q05923	314 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CD69	Q07108	199 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	MRPL49	Q13405	166 aa	Known RBP	4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ESPNL	Q6ZVH7	1005 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CDYL2	Q8N8U2	506 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	BEND2	Q8NDZ0	799 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	FERMT2	Q96AC1	680 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	SERHL2	Q9H4I8	314 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ADARB2	Q9NS39	739 aa	Known RBP	4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PODXL2	Q9NZ53	605 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ANKFY1	Q9P2R3	1169 aa		4.88	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ABCC9	O60706	1549 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GAGE12B	A1L429	117 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GAGE12H	A6NDE8	117 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	AHRR	A9YTQ3	701 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	KIAA0355	O15063	1070 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NRP2	O60462	931 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	APOBEC3A	P31941	199 aa	Predicted RBP	4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ZEB1	P37275	1124 aa	Predicted RBP	4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	IL12RB1	P42701	662 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CSRP2	Q16527	193 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	DOK3	Q7L591	496 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GDF7	Q7Z4P5	450 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PIK3C3	Q8NEB9	887 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PPP1R14C	Q8TAE6	165 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CAVIN3	Q969G5	261 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CPEB1	Q9BZB8	566 aa	Known RBP	4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	WDR11	Q9BZH6	1224 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	SPON1	Q9HCB6	807 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	AKIP1	Q9NQ31	210 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	USP18	Q9UMW8	372 aa		4.87	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	TMEM200C	A6NKL6	621 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LPXN	O60711	386 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NDUFA10	O95299	355 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LY86	O95711	162 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ZFP36	P26651	326 aa	Known RBP	4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NRG3	P56975	720 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LRRC32	Q14392	662 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NFE2L2	Q16236	605 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ERCC6L	Q2NKX8	1250 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	LMBR1L	Q6UX01	489 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721		Q6YL49	198 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	TAS1R1	Q7RTX1	841 aa		4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	USP36	Q9P275	1121 aa	Known RBP	4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.86	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	DIRC3	C9JPN6	131 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	NCR1	O76036	304 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CFB	P00751	764 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	HLA-DOA	P06340	250 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	ATP2A2	P16615	1042 aa	Known RBP	4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	SDS	P20132	328 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GPR15	P49685	360 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	C21orf58	P58505	322 aa		4.85	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	FAM189B	P81408	668 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms