RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MINDY3Q9H8M7 445 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 NGRNQ9NPE2 291 aaKnown RBP20.63■□□□□ 0.89
CCDC171-206ENST00000474193 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.63■□□□□ 0.89
CCDC171-206ENST00000474193 RNF19AQ9NV58 838 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 INPP5FQ9Y2H2 1132 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 H3BQ06 376 aaPredicted RBP20.62■□□□□ 0.89
CCDC171-206ENST00000474193 SRGAP2BP0DMP2 458 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 ATF7P17544 494 aaPredicted RBP20.62■□□□□ 0.89
CCDC171-206ENST00000474193 DNAJB1P25685 340 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 NDUFV1P49821 464 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 CAPSQ13938 189 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 CAMK1Q14012 370 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 PPP2R5AQ15172 486 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 TMEM132AQ24JP5 1023 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 LONRF3Q496Y0 759 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 POTEGQ6S5H5 508 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 PADI6Q6TGC4 694 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 TMC7Q7Z402 723 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 C4orf32Q8N8J7 132 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 LPPQ93052 612 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 TMEM169Q96HH4 297 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 ENTPD7Q9NQZ7 604 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 CIZ1Q9ULV3 898 aaPredicted RBP20.62■□□□□ 0.89
CCDC171-206ENST00000474193 DNM3Q9UQ16 869 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 ARID2Q68CP9 1835 aa20.62■□□□□ 0.89
CCDC171-206ENST00000474193 TTC28Q96AY4 2481 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 ITGA4P13612 1032 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 CYP11B2P19099 503 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 GLRA2P23416 452 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 NRIP1P48552 1158 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 FAM173BQ6P4H8 233 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 MRPL10Q7Z7H8 261 aaKnown RBP20.61■□□□□ 0.89
CCDC171-206ENST00000474193 RBM23Q86U06 439 aaKnown RBP20.61■□□□□ 0.89
CCDC171-206ENST00000474193 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.61■□□□□ 0.89
CCDC171-206ENST00000474193 ASAP3Q8TDY4 903 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 IFT74Q96LB3 600 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 CDCA3Q99618 268 aaPredicted RBP20.61■□□□□ 0.89
CCDC171-206ENST00000474193 RSAD1Q9HA92 442 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 HCSTQ9UBK5 93 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 KIAA1024Q9UPX6 916 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 KIAA1671Q9BY89 1806 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 BRWD1Q9NSI6 2320 aa20.61■□□□□ 0.89
CCDC171-206ENST00000474193 GRXCR2A6NFK2 248 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 ZC3H11AO75152 810 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 OFD1O75665 1012 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 HOXA11P31270 313 aaPredicted RBP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 IRS1P35568 1242 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 BCAR1P56945 870 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 ADAM15Q13444 863 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 COL19A1Q14993 1142 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 SF3A1Q15459 793 aaKnown RBP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 CTC1Q2NKJ3 1217 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 FOXD4L6Q3SYB3 417 aaPredicted RBP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 ATL3Q6DD88 541 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 FOXD4L3Q6VB84 417 aaPredicted RBP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 IGSF22Q8N9C0 903 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 CSRNP2Q9H175 543 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
CCDC171-206ENST00000474193 STK39Q9UEW8 545 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 CFAP45Q9UL16 551 aa20.6■□□□□ 0.89
CCDC171-206ENST00000474193 TSPAN1O60635 241 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 ALDH2P05091 517 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 NCLP19338 710 aaKnown RBP20.59■□□□□ 0.89
CCDC171-206ENST00000474193 CA8P35219 290 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 CEBPZQ03701 1054 aaKnown RBP20.59■□□□□ 0.89
CCDC171-206ENST00000474193 MBTD1Q05BQ5 628 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 KIFAP3Q92845 792 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 CDK5RAP3Q96JB5 506 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 PRIMPOLQ96LW4 560 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 NECAB3Q96P71 396 aaPredicted RBP20.59■□□□□ 0.89
CCDC171-206ENST00000474193 TCF25Q9BQ70 676 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 GBP3Q9H0R5 595 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 BHMT2Q9H2M3 363 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 DDX19AQ9NUU7 478 aaKnown RBP20.59■□□□□ 0.89
CCDC171-206ENST00000474193 TBC1D13Q9NVG8 400 aa20.59■□□□□ 0.89
CCDC171-206ENST00000474193 NCOR1O75376 2440 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 NR1I2O75469 434 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 DDIT3P35638 169 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 ERVFC1P60507 584 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 ATP2C1P98194 919 aaPredicted RBP20.58■□□□□ 0.89
CCDC171-206ENST00000474193 MAPK6Q16659 721 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 PLPP4Q5VZY2 271 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 SLC39A11Q8N1S5 342 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 KCTD17Q8N5Z5 321 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 CPB2Q96IY4 423 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 GPRC5CQ9NQ84 441 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 CHMP5Q9NZZ3 219 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 CD207Q9UJ71 328 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 ZDHHC9Q9Y397 364 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 CLIC4Q9Y696 253 aa20.58■□□□□ 0.89
CCDC171-206ENST00000474193 NT5C1B-RDH14C9J2C7 533 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 SSTR3P32745 418 aaPredicted RBP20.57■□□□□ 0.88
CCDC171-206ENST00000474193 PBX3P40426 434 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 NAMPTP43490 491 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms