RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 MYCT1Q8N699 235 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 IQUBQ8NA54 791 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
USF1-205ENST00000473969 ADPGKQ9BRR6 497 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 TMEM117Q9H0C3 514 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 FZD8Q9H461 694 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 CUEDC2Q9H467 287 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 MTUS1Q9ULD2 1270 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 PCDHB2Q9Y5E7 798 aa15.16■□□□□ 0.02
USF1-205ENST00000473969 ACKR2O00590 384 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 N4BP3O15049 544 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 ZNF623O75123 536 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 FOSL2P15408 326 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
USF1-205ENST00000473969 IGFBP4P22692 258 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 HOXA11P31270 313 aaPredicted RBP15.15■□□□□ 0.02
USF1-205ENST00000473969 AMPD3Q01432 767 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 ARSHQ5FYA8 562 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 SLC27A1Q6PCB7 646 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 DAW1Q8N136 415 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 LEO1Q8WVC0 666 aaPredicted RBP15.15■□□□□ 0.02
USF1-205ENST00000473969 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 MYLIPQ8WY64 445 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 REEP2Q9BRK0 252 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 KIFC3Q9BVG8 833 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 TMEM134Q9H6X4 195 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 UBN1Q9NPG3 1134 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 AAASQ9NRG9 546 aa15.15■□□□□ 0.02
USF1-205ENST00000473969 SLC16A4O15374 487 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 B4GALT5O43286 388 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
USF1-205ENST00000473969 ITGA4P13612 1032 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 SCP2P22307 547 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 ABCD1P33897 745 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 CTNNB1P35222 781 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 MAPK7Q13164 816 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 GIT2Q14161 759 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 AMHR2Q16671 573 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 AXDND1Q5T1B0 1012 aaPredicted RBP15.14■□□□□ 0.01
USF1-205ENST00000473969 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 DYMQ7RTS9 669 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 TMEM192Q8IY95 271 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 CRIPAKQ8N1N5 446 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 SLC17A8Q8NDX2 589 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 DHX58Q96C10 678 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 NTPCRQ9BSD7 190 aaKnown RBP15.14■□□□□ 0.01
USF1-205ENST00000473969 C17orf80Q9BSJ5 609 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 MRPL9Q9BYD2 267 aaKnown RBP15.14■□□□□ 0.01
USF1-205ENST00000473969 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
USF1-205ENST00000473969 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 TTC3P53804 2025 aa15.14■□□□□ 0.01
USF1-205ENST00000473969 A0A1B0GUA9 196 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 POLR2DO15514 142 aaKnown RBP15.13■□□□□ 0.01
USF1-205ENST00000473969 ARHGEF15O94989 841 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 NPTXRO95502 500 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 RB1P06400 928 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 IDEP14735 1019 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 GATMP50440 423 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
USF1-205ENST00000473969 EPC2Q52LR7 807 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 RESP18Q5W5W9 173 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 ADALQ6DHV7 355 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 ZNF598Q86UK7 904 aaKnown RBP15.13■□□□□ 0.01
USF1-205ENST00000473969 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 LRRC43Q8N309 656 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 LRRC15Q8TF66 581 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 DDX12PQ92771 950 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 MRPL4Q9BYD3 311 aaKnown RBP15.13■□□□□ 0.01
USF1-205ENST00000473969 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
USF1-205ENST00000473969 ARHGAP28Q9P2N2 729 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 PCDHB12Q9Y5F1 795 aa15.13■□□□□ 0.01
USF1-205ENST00000473969 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 TRAK2O60296 914 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 CMA1P23946 247 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 BMPR1AP36894 532 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 UBXN11Q5T124 520 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 ATF7IP2Q5U623 682 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 MRPL10Q7Z7H8 261 aaKnown RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 CDR2LQ86X02 465 aaPredicted RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 CLP1Q92989 425 aaKnown RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 LPPQ93052 612 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 BICD1Q96G01 975 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 CASD1Q96PB1 797 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 TCHPQ9BT92 498 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 C11orf84Q9BUA3 381 aaPredicted RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms