RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 NTPCRQ9BSD7 190 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 CARD6Q9BX69 1037 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 PACSIN1Q9BY11 444 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 IFIH1Q9BYX4 1025 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 INTS2Q9H0H0 1204 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP28Q9P2N2 729 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 MORF4L1Q9UBU8 362 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ZHX1Q9UKY1 873 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 PCDHA13Q9Y5I0 950 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 A0A087X0T9 212 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 FAM228BP0C875 321 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ZBTB48P10074 688 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 CLCN3P51790 818 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 PTK2Q05397 1052 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 KLHL30Q0D2K2 578 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 SPA17Q15506 151 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ASTE1Q2TB18 679 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ARHGEF19Q8IW93 802 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 DEPTORQ8TB45 409 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 SCFD2Q8WU76 684 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 NRBP2Q9NSY0 501 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 DNAJC12Q9UKB3 198 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ASB14A6NK59 587 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 IPO7O95373 1038 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLK1-210ENST00000473565 MAGEA1P43355 309 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 GCLCP48506 637 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 LIG4P49917 911 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 NLRP11P59045 1033 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 CDK17Q00537 523 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 SLC9C1Q4G0N8 1177 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 SCARA3Q6AZY7 606 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 INTS8Q75QN2 995 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 ZNF571Q7Z3V5 609 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 IRF2BP2Q7Z5L9 587 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 CCDC170Q8IYT3 715 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 METTL13Q8N6R0 699 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 AFAP1L1Q8TED9 768 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 MAML3Q96JK9 1138 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ARID3AQ99856 593 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 KATNBL1Q9H079 304 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 L2HGDHQ9H9P8 463 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 PLCB1Q9NQ66 1216 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 EXOC7Q9UPT5 735 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 LRRIQ3A6PVS8 624 aaPredicted RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 SLU7O95391 586 aaKnown RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 MOCS3O95396 460 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 SERPING1P05155 500 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 MATR3P43243 847 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLK1-210ENST00000473565 VAV2P52735 878 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 KRT83P78385 493 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 DRAP1Q14919 205 aaPredicted RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 PPP2R5AQ15172 486 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 CCL14Q16627 93 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PLEKHH3Q7Z736 793 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 RHPN2Q8IUC4 686 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 C12orf56Q8IXR9 622 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 LMO3Q8TAP4 145 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 ATP8B4Q8TF62 1192 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 SEMA4DQ92854 862 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 IQCDQ96DY2 449 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 NLRP4Q96MN2 994 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 EDEM3Q9BZQ6 932 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 ACP6Q9NPH0 428 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 FLRT1Q9NZU1 646 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 CAPN6Q9Y6Q1 641 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 TRPM7Q96QT4 1865 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 K7ERI5 159 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 CTIFO43310 598 aaKnown RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 BUB1O43683 1085 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 SRGAP2O75044 1071 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 LGR5O75473 907 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 CALCAP01258 141 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 LGALS2P05162 132 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 SMPD1P17405 629 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 MXI1P50539 228 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 JAM2P57087 298 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 STRN3Q13033 797 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 GRB14Q14449 540 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 ELF2Q15723 593 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PTPROQ16827 1216 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 ERCC6LQ2NKX8 1250 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 ZBTB33Q86T24 672 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms