RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PHLPP1O60346 1717 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 A0A087X0M5 115 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 A0A1B0GX30 115 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 RHPN2P1A8MT19 583 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ADAMTS3O15072 1205 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TADA3O75528 432 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TUSC2O75896 110 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TGDSO95455 350 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 SOD2P04179 222 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 CYP2E1P05181 493 aaPredicted RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 ACRP10323 421 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 BMP3P12645 472 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 KRT13P13646 458 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 PTPRAP18433 802 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 IL4RP24394 825 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ABCD1P33897 745 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 HSPA4P34932 840 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ACTN2P35609 894 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 CD86P42081 329 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 PHKA1P46020 1223 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TUBP50607 506 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 CSE1LP55060 971 aaKnown RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 SESN3P58005 492 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 COX10Q12887 443 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 SETMARQ53H47 684 aaPredicted RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 FAM209BQ5JX69 171 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ATAT1Q5SQI0 421 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 RNF220Q5VTB9 566 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 IRGCQ6NXR0 463 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TATDN1Q6P1N9 297 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 KIF18BQ86Y91 864 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 KRT78Q8N1N4 520 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 STON2Q8WXE9 905 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 WNT8BQ93098 351 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 SYAP1Q96A49 352 aaPredicted RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 UROC1Q96N76 676 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 SIL1Q9H173 461 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 TMEM60Q9H2L4 133 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 THG1LQ9NWX6 298 aaKnown RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 KCTD5Q9NXV2 234 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ZSWIM5Q9P217 1185 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 CPSF2Q9P2I0 782 aaKnown RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 KANSL3Q9P2N6 904 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 CORO2BQ9UQ03 480 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 DAGLAQ9Y4D2 1042 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 COL16A1Q07092 1604 aaPredicted RBP6.68□□□□□ -1.34
RTF1-203ENST00000473214 ADGBQ8N7X0 1667 aa6.68□□□□□ -1.34
RTF1-203ENST00000473214 ARHGAP35Q9NRY4 1499 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 PGPEP1LA6NFU8 196 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 F5H0A9 414 aaPredicted RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 KIF1CO43896 1103 aaKnown RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 MGEA5O60502 916 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 EOMESO95936 686 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 CKMT1AP12532 417 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 P4HA1P13674 534 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 GRIA2P42262 883 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 PREPP48147 710 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 LIMK1P53667 647 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 RCAN1P53805 252 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 SCAND1P57086 179 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 AKAP17AQ02040 695 aaKnown RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 DSG1Q02413 1049 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 LRRC32Q14392 662 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 SMAD1Q15797 465 aaKnown RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 HAUS3Q68CZ6 603 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 RAPH1Q70E73 1250 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 SYTL1Q8IYJ3 562 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 MIER2Q8N344 545 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 LRRN4CLQ8ND94 238 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 ERCC4Q92889 916 aaPredicted RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 ATP2A3Q93084 1043 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 TMEM41AQ96HV5 264 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 CNDP2Q96KP4 475 aaKnown RBP6.67□□□□□ -1.34
RTF1-203ENST00000473214 TSGA13Q96PP4 275 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 TCF12Q99081 682 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 B3GNT5Q9BYG0 378 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 KRTAP4-2Q9BYR5 136 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 DISC1Q9NRI5 854 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 SPTLC3Q9NUV7 552 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 HAUS2Q9NVX0 235 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 POGKQ9P215 609 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 TBC1D29Q9UFV1 150 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 DENND2AQ9ULE3 1009 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 SAMM50Q9Y512 469 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 RGS12O14924 1447 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
RTF1-203ENST00000473214 CCDC66A2RUB6 948 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 BLACEA4D250 179 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 FAM25EA8MYX2 175 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 BOLA2-SMG1P6H3BVE0 249 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 STXBP3O00186 592 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 DOK2O60496 412 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms