RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GEMIN8Q9NWZ8 242 aaKnown RBP22.79■■□□□ 1.24
COL18A1-207ENST00000473212 FRMD4BQ9Y2L6 1034 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 RBBP6Q7Z6E9 1792 aaKnown RBP22.79■■□□□ 1.24
COL18A1-207ENST00000473212 SLX4Q8IY92 1834 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 TLDC2A0PJX2 215 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 PIK3CDO00329 1044 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 CTNND1O60716 968 aaKnown RBP22.79■■□□□ 1.24
COL18A1-207ENST00000473212 ALDH1B1P30837 517 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 HSPA1LP34931 641 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 CDR1P51861 262 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 SLC15A2Q16348 729 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 SPDYCQ5MJ68 293 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 ERMARDQ5T6L9 678 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 ARMC9Q7Z3E5 817 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 FBXO25Q8TCJ0 367 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 RNF25Q96BH1 459 aaPredicted RBP22.79■■□□□ 1.24
COL18A1-207ENST00000473212 C18orf8Q96DM3 657 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 MKNK1Q9BUB5 465 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 TUFT1Q9NNX1 390 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 ANKRD62A6NC57 917 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 SMIM23A6NLE4 172 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 PPP2R5CQ13362 524 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 PPP2R5EQ16537 467 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 SLC27A3Q5K4L6 730 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 ZDHHC24Q6UX98 284 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 SYCP3Q8IZU3 236 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 NEK9Q8TD19 979 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 ZKSCAN4Q969J2 545 aaPredicted RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 CHMP6Q96FZ7 201 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 MYCBPQ99417 103 aaPredicted RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 ZNF577Q9BSK1 485 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 GLIS2Q9BZE0 524 aaPredicted RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 PABPC3Q9H361 631 aaKnown RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 HAUS2Q9NVX0 235 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 ALG6Q9Y672 507 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 FAM187AA6NFU0 413 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 KIAA0391O15091 583 aaKnown RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 CHN1P15882 459 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 VCAM1P19320 739 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 SCTRP47872 440 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 ZNF131P52739 623 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 PPP3CAQ08209 521 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 BFSP1Q12934 665 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 DENND2CQ68D51 928 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 SELENOSQ9BQE4 189 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 CBWD1Q9BRT8 395 aa22.78■■□□□ 1.24
COL18A1-207ENST00000473212 UBE2TQ9NPD8 197 aaPredicted RBP22.78■■□□□ 1.24
COL18A1-207ENST00000473212 EMSYQ7Z589 1322 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 CHUKO15111 745 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 NUDT17P0C025 328 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 CCDC172P0C7W6 258 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 GCLMP48507 274 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 GSCP56915 257 aaPredicted RBP22.77■■□□□ 1.24
COL18A1-207ENST00000473212 DHX34Q14147 1143 aaKnown RBP22.77■■□□□ 1.24
COL18A1-207ENST00000473212 NFIL3Q16649 462 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 CEP55Q53EZ4 464 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 UHMK1Q8TAS1 419 aaKnown RBP22.77■■□□□ 1.24
COL18A1-207ENST00000473212 MASTLQ96GX5 879 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 FAM129AQ9BZQ8 928 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 PLEKHO2Q8TD55 490 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 BTBD6Q96KE9 485 aa22.77■■□□□ 1.24
COL18A1-207ENST00000473212 POLR2MP0CAP2 368 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 CHRNA5P30532 468 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 SLC29A2Q14542 456 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 FUKQ8N0W3 1084 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 TMX4Q9H1E5 349 aaPredicted RBP22.76■■□□□ 1.23
COL18A1-207ENST00000473212 AZI2Q9H6S1 392 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.76■■□□□ 1.23
COL18A1-207ENST00000473212 A1CFQ9NQ94 594 aaKnown RBP22.76■■□□□ 1.23
COL18A1-207ENST00000473212 ZBTB21Q9ULJ3 1066 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 SCAF8Q9UPN6 1271 aaKnown RBP22.76■■□□□ 1.23
COL18A1-207ENST00000473212 TCRBV7S2A1N4TA0A589 114 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 K7ENM7 598 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
COL18A1-207ENST00000473212 CYB5D1Q6P9G0 228 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 CCT6BQ92526 530 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 CENPTQ96BT3 561 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 AGPAT1Q99943 283 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 CTTNBP2NLQ9P2B4 639 aa22.76■■□□□ 1.23
COL18A1-207ENST00000473212 MMEP08473 750 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 MAP2K2P36507 400 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 KIF22Q14807 665 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 GRIPAP1Q4V328 841 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 IL31RAQ8NI17 732 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 HVCN1Q96D96 273 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 GRHL1Q9NZI5 618 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 RASAL2Q9UJF2 1139 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 RPTORQ8N122 1335 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 FTLP02792 175 aaPredicted RBP22.75■■□□□ 1.23
COL18A1-207ENST00000473212 PTGIRP43119 386 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 IFI35P80217 286 aaPredicted RBP22.75■■□□□ 1.23
COL18A1-207ENST00000473212 PDE4CQ08493 712 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 LACTB2Q53H82 288 aaPredicted RBP22.75■■□□□ 1.23
COL18A1-207ENST00000473212 FAM84AQ96KN4 292 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 PCDHB18PQ96TA0 734 aa22.75■■□□□ 1.23
COL18A1-207ENST00000473212 IPO5O00410 1097 aaKnown RBP22.74■■□□□ 1.23
COL18A1-207ENST00000473212 PHF2O75151 1096 aa22.74■■□□□ 1.23
COL18A1-207ENST00000473212 ITGB5P18084 799 aa22.74■■□□□ 1.23
COL18A1-207ENST00000473212 RDXP35241 583 aaKnown RBP22.74■■□□□ 1.23
COL18A1-207ENST00000473212 PPP2R5AQ15172 486 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms