RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SPEF1Q9Y4P9 236 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 LTA4HP09960 611 aaKnown RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 CR2P20023 1033 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 C5AR1P21730 350 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 CTSSP25774 331 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 SLC5A3P53794 718 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 MBNL2Q5VZF2 373 aaKnown RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 SLFN13Q68D06 897 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 BTNL9Q6UXG8 535 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 PNMA8AQ86V59 439 aaPredicted RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 TAX1BP1Q86VP1 789 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 FATE1Q969F0 183 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 TEKT5Q96M29 485 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 PUS7Q96PZ0 661 aaKnown RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 SSBP3Q9BWW4 388 aaPredicted RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 C14orf93Q9H972 538 aaKnown RBP7.59□□□□□ -1.19
CLK1-209ENST00000472679 TUBD1Q9UJT1 453 aa7.59□□□□□ -1.19
CLK1-209ENST00000472679 NPEPPSL1A6NEC2 478 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 SLC26A4O43511 780 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 CDC14BO60729 498 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 PRAMEF4O60810 478 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 VSIG10L2P0DP72 767 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 KRT85P78386 507 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 MCL1Q07820 350 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 PPP3CAQ08209 521 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 DUSP8Q13202 625 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 ANO4Q32M45 955 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 ZBTB46Q86UZ6 589 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 RABGGTAQ92696 567 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 CHMP4CQ96CF2 233 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 RBM15Q96T37 977 aaKnown RBP eCLIP7.58□□□□□ -1.2
CLK1-209ENST00000472679 MRFAP1Q9Y605 127 aa7.58□□□□□ -1.2
CLK1-209ENST00000472679 GPR42O15529 346 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 NDUFS2O75306 463 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 CCND1P24385 295 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 MALLQ13021 153 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 RIN1Q13671 783 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 MUM1L1Q5H9M0 696 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 ODR4Q5SWX8 454 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 ADGRE4PQ86SQ3 457 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 SHCBP1Q8NEM2 672 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 RIN2Q8WYP3 895 aaPredicted RBP7.57□□□□□ -1.2
CLK1-209ENST00000472679 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 GREM2Q9H772 168 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 TLR9Q9NR96 1032 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 AASDHPPTQ9NRN7 309 aa7.57□□□□□ -1.2
CLK1-209ENST00000472679 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
CLK1-209ENST00000472679 JUNP05412 331 aaKnown RBP7.56□□□□□ -1.2
CLK1-209ENST00000472679 MCAMP43121 646 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 MEF2AQ02078 507 aaPredicted RBP7.56□□□□□ -1.2
CLK1-209ENST00000472679 NFIXQ14938 502 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 GAGE13Q4V321 117 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 KRT40Q6A162 431 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
CLK1-209ENST00000472679 SNX33Q8WV41 574 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 SSH1Q8WYL5 1049 aa7.56□□□□□ -1.2
CLK1-209ENST00000472679 LUC7L2Q9Y383 392 aaKnown RBP7.56□□□□□ -1.2
CLK1-209ENST00000472679 RPTORQ8N122 1335 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 PMS2P1A4D2B8 440 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 MTSS1O43312 755 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 FOXS1O43638 330 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 ZRANB2O95218 330 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLK1-209ENST00000472679 GSPT1P15170 499 aaKnown RBP7.55□□□□□ -1.2
CLK1-209ENST00000472679 ADSLP30566 484 aaPredicted RBP7.55□□□□□ -1.2
CLK1-209ENST00000472679 C19orf54Q5BKX5 351 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 EFCAB2Q5VUJ9 269 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 TCTN3Q6NUS6 607 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 GPR156Q8NFN8 814 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 BDH2Q9BUT1 245 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 NCDNQ9UBB6 729 aa7.55□□□□□ -1.2
CLK1-209ENST00000472679 UBE2QL1A1L167 161 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 AKR1B10O60218 316 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
CLK1-209ENST00000472679 S100BP04271 92 aaPredicted RBP7.54□□□□□ -1.2
CLK1-209ENST00000472679 ITGB3P05106 788 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 CASRP41180 1078 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 RECQLP46063 649 aaPredicted RBP7.54□□□□□ -1.2
CLK1-209ENST00000472679 RAB27AP51159 221 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 CTSWP56202 376 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 Q6ZVL8 140 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 GIMAP8Q8ND71 665 aaPredicted RBP7.54□□□□□ -1.2
CLK1-209ENST00000472679 OR2I1PQ8NGU4 316 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 NRG4Q8WWG1 115 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 DPF2Q92785 391 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 TMEM176AQ96HP8 235 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 OR14A2Q96R54 314 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 ADI1Q9BV57 179 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 IL23AQ9NPF7 189 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 DNM3Q9UQ16 869 aa7.54□□□□□ -1.2
CLK1-209ENST00000472679 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 AKAP10O43572 662 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 SEPT2Q15019 361 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 NOMO1Q15155 1222 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 CIR1Q86X95 450 aaPredicted RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms