RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ADALQ6DHV7 355 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 Q7L0L9 218 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 DAW1Q8N136 415 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 PDILTQ8N807 584 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 RNF169Q8NCN4 708 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 SLC17A8Q8NDX2 589 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 TET1Q8NFU7 2136 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 REEP2Q9BRK0 252 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 PANK2Q9BZ23 570 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 TMEM134Q9H6X4 195 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 PCDHB2Q9Y5E7 798 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 ARID2Q68CP9 1835 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 TRIOBPQ9H2D6 2365 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 LCHNA4D1U4 455 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 SFI1A8K8P3 1242 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 PRKCBP05771 671 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 ARF4P18085 180 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-211ENST00000472490 LIG1P18858 919 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 ERVK-21P61565 698 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 STRN3Q13033 797 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 GIT2Q14161 759 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 AMHR2Q16671 573 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 NAALADL2Q58DX5 795 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 RESP18Q5W5W9 173 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 SLC27A1Q6PCB7 646 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 MYCT1Q8N699 235 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 GAS2L1Q99501 681 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-211ENST00000472490 ADPGKQ9BRR6 497 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 CCDC113Q9H0I3 377 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 ZHX3Q9H4I2 956 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 MAGEF1Q9HAY2 307 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 POLD4Q9HCU8 107 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 CNTNAP2Q9UHC6 1331 aa15.65■□□□□ 0.1
BRCA1-211ENST00000472490 COL4A6Q14031 1691 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 RBAK-RBAKDNI3L0D1 243 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 N4BP3O15049 544 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 CMA1P23946 247 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 ZNF131P52739 623 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 GRIN2CQ14957 1233 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 GLB1LQ6UWU2 654 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
BRCA1-211ENST00000472490 LRRC15Q8TF66 581 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 ARNTL2Q8WYA1 636 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 DDX12PQ92771 950 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 EVPLQ92817 2033 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 DHX58Q96C10 678 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 CPB2Q96IY4 423 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 KIFC3Q9BVG8 833 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 MRPL9Q9BYD2 267 aaKnown RBP15.64■□□□□ 0.09
BRCA1-211ENST00000472490 RC3H2Q9HBD1 1191 aaKnown RBP15.64■□□□□ 0.09
BRCA1-211ENST00000472490 AAASQ9NRG9 546 aa15.64■□□□□ 0.09
BRCA1-211ENST00000472490 A0A087X0B3 334 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 CARNS1A5YM72 827 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 TBKBP1A7MCY6 615 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 SLC16A4O15374 487 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
BRCA1-211ENST00000472490 B4GALT5O43286 388 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 TRAK2O60296 914 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 FGFR1P11362 822 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 GAP43P17677 238 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 PAN2Q504Q3 1202 aaKnown RBP15.63■□□□□ 0.09
BRCA1-211ENST00000472490 DYMQ7RTS9 669 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 FAM178BQ8IXR5 827 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 CEP57L1Q8IYX8 460 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 LRRC43Q8N309 656 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 CLP1Q92989 425 aaKnown RBP15.63■□□□□ 0.09
BRCA1-211ENST00000472490 CDX2Q99626 313 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-211ENST00000472490 MRPL4Q9BYD3 311 aaKnown RBP15.63■□□□□ 0.09
BRCA1-211ENST00000472490 SEL1LQ9UBV2 794 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 USP25Q9UHP3 1055 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
BRCA1-211ENST00000472490 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 MICAL3Q7RTP6 2002 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 RB1P06400 928 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 ITGA4P13612 1032 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 NCKAP1LP55160 1127 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 UBXN11Q5T124 520 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 SPOUT1Q5T280 376 aaKnown RBP15.62■□□□□ 0.09
BRCA1-211ENST00000472490 ATF7IP2Q5U623 682 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 MRPL10Q7Z7H8 261 aaKnown RBP15.62■□□□□ 0.09
BRCA1-211ENST00000472490 TMEM192Q8IY95 271 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 TMEM161BQ8NDZ6 487 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 KCNN1Q92952 543 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 C11orf84Q9BUA3 381 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-211ENST00000472490 PLVAPQ9BX97 442 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 PRDM12Q9H4Q4 367 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 CERS4Q9HA82 394 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 KBTBD4Q9NVX7 518 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 CHMP5Q9NZZ3 219 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 KANSL3Q9P2N6 904 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 MTUS1Q9ULD2 1270 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms