RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 HOXA11P31270 313 aaPredicted RBP18.5■□□□□ 0.55
TSPO-205ENST00000472378 CTNNB1P35222 781 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 ME1P48163 572 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 KRT85P78386 507 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 GRIN1Q05586 938 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 PRPF4BQ13523 1007 aaKnown RBP18.5■□□□□ 0.55
TSPO-205ENST00000472378 SPOUT1Q5T280 376 aaKnown RBP18.5■□□□□ 0.55
TSPO-205ENST00000472378 SLC27A1Q6PCB7 646 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 ZNF598Q86UK7 904 aaKnown RBP18.5■□□□□ 0.55
TSPO-205ENST00000472378 GPBP1Q86WP2 473 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 LRRC43Q8N309 656 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 SLC17A8Q8NDX2 589 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 P2RX5Q93086 422 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 CLIC6Q96NY7 704 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 NTPCRQ9BSD7 190 aaKnown RBP18.5■□□□□ 0.55
TSPO-205ENST00000472378 RUSC1Q9BVN2 902 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 FZD8Q9H461 694 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 KMT5AQ9NQR1 393 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 KANSL3Q9P2N6 904 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 MTUS1Q9ULD2 1270 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 PCDHB12Q9Y5F1 795 aa18.5■□□□□ 0.55
TSPO-205ENST00000472378 A0A1B0GUA9 196 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
TSPO-205ENST00000472378 PLS3P13797 630 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 STAT6P42226 847 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 PEX3P56589 373 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 PKP1Q13835 747 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 PAN2Q504Q3 1202 aaKnown RBP18.49■□□□□ 0.55
TSPO-205ENST00000472378 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 MAFAQ8NHW3 353 aaPredicted RBP18.49■□□□□ 0.55
TSPO-205ENST00000472378 URGCPQ8TCY9 931 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 SPIRE2Q8WWL2 714 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 C17orf80Q9BSJ5 609 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 CUEDC2Q9H467 287 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 TMEM134Q9H6X4 195 aa18.49■□□□□ 0.55
TSPO-205ENST00000472378 NLRC5Q86WI3 1866 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 H3BNC9 293 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 PRKCBP05771 671 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 FGFR1P11362 822 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 ARF4P18085 180 aaPredicted RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 LAG3P18627 525 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 NPTX2P47972 431 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 STRN3Q13033 797 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 DHX8Q14562 1220 aaKnown RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 FOXD4L6Q3SYB3 417 aaPredicted RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 SPECC1Q5M775 1068 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 FOXD4L3Q6VB84 417 aaPredicted RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 MRPL10Q7Z7H8 261 aaKnown RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 BSNDQ8WZ55 320 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 SCAND2PQ9GZW5 306 aaPredicted RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 LMAN2LQ9H0V9 348 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 FAM13BQ9NYF5 915 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 RCOR1Q9UKL0 485 aa18.48■□□□□ 0.55
TSPO-205ENST00000472378 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
TSPO-205ENST00000472378 FAM13AO94988 1023 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 ARHGEF15O94989 841 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 ITGA4P13612 1032 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 PPM1AP35813 382 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 AMPD3Q01432 767 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 DNM1Q05193 864 aaKnown RBP18.47■□□□□ 0.55
TSPO-205ENST00000472378 GPM6BQ13491 265 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 MCM6Q14566 821 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 AMHR2Q16671 573 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 IQUBQ8NA54 791 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 CASD1Q96PB1 797 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 PARVGQ9HBI0 331 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 BLOC1S4Q9NUP1 217 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 ARHGAP28Q9P2N2 729 aa18.47■□□□□ 0.55
TSPO-205ENST00000472378 MRPL42Q9Y6G3 142 aaKnown RBP18.47■□□□□ 0.55
TSPO-205ENST00000472378 CHD9Q3L8U1 2897 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 ZMYM2Q9UBW7 1377 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 LIG1P18858 919 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 RNASELQ05823 741 aaKnown RBP18.46■□□□□ 0.55
TSPO-205ENST00000472378 RAD51AP2Q09MP3 1159 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 MAPK7Q13164 816 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 NOMO2Q5JPE7 1267 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 USP49Q70CQ1 688 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 DAW1Q8N136 415 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 HELQQ8TDG4 1101 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 CPB2Q96IY4 423 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 SPATA32Q96LK8 384 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 MRPL4Q9BYD3 311 aaKnown RBP18.46■□□□□ 0.55
TSPO-205ENST00000472378 CCDC113Q9H0I3 377 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 RSAD1Q9HA92 442 aa18.46■□□□□ 0.55
TSPO-205ENST00000472378 TYW1Q9NV66 732 aaKnown RBP18.46■□□□□ 0.55
TSPO-205ENST00000472378 ATF7P17544 494 aaPredicted RBP18.45■□□□□ 0.54
TSPO-205ENST00000472378 ANP32AP39687 249 aaKnown RBP18.45■□□□□ 0.54
TSPO-205ENST00000472378 ALDH7A1P49419 539 aaKnown RBP18.45■□□□□ 0.54
TSPO-205ENST00000472378 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 UBXN11Q5T124 520 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 MYCT1Q8N699 235 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 GDPD5Q8WTR4 605 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 PPP2R3CQ969Q6 453 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 MRPL38Q96DV4 380 aaKnown RBP18.45■□□□□ 0.54
TSPO-205ENST00000472378 REEP2Q9BRK0 252 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
TSPO-205ENST00000472378 PUF60Q9UHX1 559 aaKnown RBP18.45■□□□□ 0.54
TSPO-205ENST00000472378 GIT1Q9Y2X7 761 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms