RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 LONRF3Q496Y0 759 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 GLB1LQ6UWU2 654 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 TMEM173Q86WV6 379 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-205ENST00000471862 ADHFE1Q8IWW8 467 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 SMG8Q8ND04 991 aaKnown RBP12.81□□□□□ -0.36
COL4A3-205ENST00000471862 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 PGBD4Q96DM1 585 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 TCF25Q9BQ70 676 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-205ENST00000471862 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
COL4A3-205ENST00000471862 BARX2Q9UMQ3 279 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-205ENST00000471862 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
COL4A3-205ENST00000471862 TDRD15B5MCY1 1934 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 CARNS1A5YM72 827 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 HIDE1A8MVS5 230 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 INPPL1O15357 1258 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 ST18O60284 1047 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 ERLIN2O94905 339 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 GALTP07902 379 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 AFF1P51825 1210 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 ECM1Q16610 540 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 TMEM184AQ6ZMB5 413 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 NACC1Q96RE7 527 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 C1QTNF1Q9BXJ1 281 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 RSAD1Q9HA92 442 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 GPRC5CQ9NQ84 441 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
COL4A3-205ENST00000471862 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 PCDHB6Q9Y5E3 794 aa12.8□□□□□ -0.36
COL4A3-205ENST00000471862 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ZC3H11AO75152 810 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 DDHD2O94830 711 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ARF4P18085 180 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 SLC11A1P49279 550 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ALDH7A1P49419 539 aaKnown RBP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 NOTUMQ6P988 496 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 TMC7Q7Z402 723 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ZNF280BQ86YH2 543 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 IGSF22Q8N9C0 903 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 TMEM169Q96HH4 297 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 IGSF21Q96ID5 467 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 ZBP1Q9H171 429 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 C11orf16Q9NQ32 467 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
COL4A3-205ENST00000471862 IPPQ9Y573 584 aa12.79□□□□□ -0.36
COL4A3-205ENST00000471862 C2orf71A6NGG8 1288 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 B4GALT5O43286 388 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 CYP11B2P19099 503 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 SSTR3P32745 418 aaPredicted RBP12.78□□□□□ -0.36
COL4A3-205ENST00000471862 PTGDRQ13258 359 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 PDIA5Q14554 519 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 SMC1AQ14683 1233 aaKnown RBP12.78□□□□□ -0.36
COL4A3-205ENST00000471862 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
COL4A3-205ENST00000471862 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
COL4A3-205ENST00000471862 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 SUSD6Q92537 303 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
COL4A3-205ENST00000471862 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
COL4A3-205ENST00000471862 A0A1B0GUA9 196 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 GPR37L1O60883 481 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 CTSAP10619 480 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 ITGA4P13612 1032 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 COL9A1P20849 921 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 GJB2P29033 226 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 PRPHP41219 470 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 MCM2P49736 904 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.37
COL4A3-205ENST00000471862 DSC1Q08554 894 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 IL17AQ16552 155 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 FAM187BQ17R55 369 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 ANKRD54Q6NXT1 300 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms