RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 CYFIP1Q7L576 1253 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 OTUD6AQ7L8S5 288 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 NIPA1Q7RTP0 329 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 MIER3Q7Z3K6 550 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 BRAPQ7Z569 592 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 NOSTRINQ8IVI9 506 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 FBXO16Q8IX29 292 aaPredicted RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 CKAP2LQ8IYA6 745 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 EXOC8Q8IYI6 725 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 ZNF295-AS1Q8N0V1 137 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 TMEM130Q8N3G9 435 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 C7orf31Q8N865 590 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 DAGLBQ8NCG7 672 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 MORC4Q8TE76 937 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 U2AF1L4Q8WU68 220 aaKnown RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 GLG1Q92896 1179 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 ARMC5Q96C12 935 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 ZNF333Q96JL9 665 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 PKNOX2Q96KN3 472 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 FBXL18Q96ME1 805 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 FAM20AQ96MK3 541 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 CCDC43Q96MW1 224 aaKnown RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 SPATA33Q96N06 139 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 AIFM3Q96NN9 605 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 FAM129BQ96TA1 746 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 RIT2Q99578 217 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 SLC38A3Q99624 504 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 KATNAL1Q9BW62 490 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 TEKT3Q9BXF9 490 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 SMARCAD1Q9H4L7 1026 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 NEUROD4Q9HD90 331 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 PDGFCQ9NRA1 345 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 TMEM260Q9NX78 707 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 DNAJB12Q9NXW2 375 aaKnown RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 FLRT1Q9NZU1 646 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 SLC9A2Q9UBY0 812 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 DDX25Q9UHL0 483 aaKnown RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 DDX41Q9UJV9 622 aaKnown RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 ZNF215Q9UL58 517 aaPredicted RBP3.17□□□□□ -1.9
DMD-219ENST00000471779 PCDHA12Q9UN75 941 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 UBIAD1Q9Y5Z9 338 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 LAMB1P07942 1786 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 DOCK3Q8IZD9 2030 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 MYH6P13533 1939 aa3.17□□□□□ -1.9
DMD-219ENST00000471779 PHIPQ8WWQ0 1821 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CYP3A7-CYP3A51PA0A087WV96 503 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 RRN3P2A6NIE6 340 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 WDR64B1ANS9 1081 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 IPO5O00410 1097 aaKnown RBP3.16□□□□□ -1.9
DMD-219ENST00000471779 LAD1O00515 517 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 OPLAHO14841 1288 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SORBS3O60504 671 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 GAS7O60861 476 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 PGK1P00558 417 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 ASGR1P07306 291 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 ARP10275 920 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CYBAP13498 195 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CPB1P15086 417 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 EN2P19622 333 aaPredicted RBP3.16□□□□□ -1.9
DMD-219ENST00000471779 SYT1P21579 422 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CYP3A7P24462 503 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 EDNRBP24530 442 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 BRD2P25440 801 aaKnown RBP3.16□□□□□ -1.9
DMD-219ENST00000471779 U2AF2P26368 475 aaKnown RBP eCLIP3.16□□□□□ -1.9
DMD-219ENST00000471779 CFPP27918 469 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 TMOD1P28289 359 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SFNP31947 248 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CIITAP33076 1130 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 MCM7P33993 719 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SREBF1P36956 1147 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SLC26A2P50443 739 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 DNM2P50570 870 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 STAT5BP51692 787 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 ACLYP53396 1101 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SMTNP53814 917 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 DAB2P98082 770 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CDC42EP1Q00587 391 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 BEX3Q00994 111 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SP4Q02446 784 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 PTPN11Q06124 597 aaPredicted RBP3.16□□□□□ -1.9
DMD-219ENST00000471779 PDIA5Q14554 519 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 STK38Q15208 465 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 LRRC41Q15345 812 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 EPHA7Q15375 998 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 CALCRLQ16602 461 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 FSCN1Q16658 493 aaKnown RBP3.16□□□□□ -1.9
DMD-219ENST00000471779 Q4G0T1 1027 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 FAM47CQ5HY64 1035 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 TTC38Q5R3I4 469 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 MAP3K21Q5TCX8 1036 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 LRCH2Q5VUJ6 765 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 KRT79Q5XKE5 535 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 ANO1Q5XXA6 986 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 ATL3Q6DD88 541 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SWSAP1Q6NVH7 229 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 SLC39A5Q6ZMH5 540 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 DTHD1Q6ZMT9 781 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 RSPH3Q86UC2 560 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 TLK2Q86UE8 772 aa3.16□□□□□ -1.9
DMD-219ENST00000471779 NT5DC4Q86YG4 428 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms