RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FERMT3Q86UX7 667 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 CCDC83Q8IWF9 413 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 C4orf19Q8IY42 314 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 VPS52Q8N1B4 723 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 RNF149Q8NC42 400 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 IGSF21Q96ID5 467 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 B3GALT6Q96L58 329 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 CHST12Q9NRB3 414 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 FAM105AQ9NUU6 356 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 CFAP54Q96N23 3096 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 PRR33A8MZF0 331 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 MARCH6O60337 910 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 TSPAN1O60635 241 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 LILRB3O75022 631 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZNF623O75123 536 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 CDKL5O76039 1030 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 NEFLP07196 543 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 GLRA2P23416 452 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ARL2P36404 184 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 DNM2P50570 870 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 POLGP54098 1239 aaPredicted RBP9.02□□□□□ -0.97
USP48-207ENST00000471752 CAPSQ13938 189 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 CBX2Q14781 532 aaPredicted RBP9.02□□□□□ -0.97
USP48-207ENST00000471752 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
USP48-207ENST00000471752 NOMO2Q5JPE7 1267 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ODR4Q5SWX8 454 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 POTEGQ6S5H5 508 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 TMEM184AQ6ZMB5 413 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZNF410Q86VK4 478 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ABI1Q8IZP0 508 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 C4orf32Q8N8J7 132 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ST13P5Q8NFI4 369 aaPredicted RBP9.02□□□□□ -0.97
USP48-207ENST00000471752 SLC22A17Q8WUG5 538 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 BSNDQ8WZ55 320 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 FAM122AQ96E09 287 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZBP1Q9H171 429 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZSWIM4Q9H7M6 989 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 TTC12Q9H892 705 aaPredicted RBP9.02□□□□□ -0.97
USP48-207ENST00000471752 AGPAT5Q9NUQ2 364 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.97
USP48-207ENST00000471752 ZNF318Q5VUA4 2279 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 TBX3O15119 743 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 SPATA31D3P0C874 917 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 ALADP13716 330 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 GCFC2P16383 781 aaKnown RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 SFPQP23246 707 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP48-207ENST00000471752 AKAP5P24588 427 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 MCM7P33993 719 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 CA8P35219 290 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 ALDH7A1P49419 539 aaKnown RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 PTENP60484 403 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 ZXDAP98168 799 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 MBTD1Q05BQ5 628 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 IL17AQ16552 155 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 CALCRLQ16602 461 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 RARS2Q5T160 578 aaKnown RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 SPATA31D4Q6ZUB0 917 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 CATSPER3Q86XQ3 398 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 TMEM130Q8N3G9 435 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 GSTCDQ8NEC7 633 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 EDAQ92838 391 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 FBXL18Q96ME1 805 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 GAD1Q99259 594 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 PAAF1Q9BRP4 392 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 APOL6Q9BWW8 343 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 PHF7Q9BWX1 381 aaPredicted RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 POMKQ9H5K3 350 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 MARCH5Q9NX47 278 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 DACT1Q9NYF0 836 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 KLK14Q9P0G3 267 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 PUF60Q9UHX1 559 aaKnown RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 PCDHA12Q9UN75 941 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 PRG3Q9Y2Y8 225 aaPredicted RBP9.01□□□□□ -0.97
USP48-207ENST00000471752 IPPQ9Y573 584 aa9.01□□□□□ -0.97
USP48-207ENST00000471752 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9□□□□□ -0.97
USP48-207ENST00000471752 ARL5CA6NH57 179 aa9□□□□□ -0.97
USP48-207ENST00000471752 C2CD4DB7Z1M9 353 aa9□□□□□ -0.97
USP48-207ENST00000471752 C2CD2LO14523 706 aa9□□□□□ -0.97
USP48-207ENST00000471752 NRP1O14786 923 aa9□□□□□ -0.97
USP48-207ENST00000471752 HOXA2O43364 376 aa9□□□□□ -0.97
USP48-207ENST00000471752 USO1O60763 962 aaKnown RBP9□□□□□ -0.97
USP48-207ENST00000471752 LYPLA2O95372 231 aa9□□□□□ -0.97
USP48-207ENST00000471752 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
USP48-207ENST00000471752 EFEMP2O95967 443 aa9□□□□□ -0.97
USP48-207ENST00000471752 ASGR2P07307 311 aa9□□□□□ -0.97
USP48-207ENST00000471752 ARF4P18085 180 aaPredicted RBP9□□□□□ -0.97
USP48-207ENST00000471752 RFC5P40937 340 aa9□□□□□ -0.97
USP48-207ENST00000471752 RARRES1P49788 294 aa9□□□□□ -0.97
USP48-207ENST00000471752 TOB1P50616 345 aaPredicted RBP9□□□□□ -0.97
USP48-207ENST00000471752 SCNN1GP51170 649 aa9□□□□□ -0.97
USP48-207ENST00000471752 VCPP55072 806 aaKnown RBP9□□□□□ -0.97
USP48-207ENST00000471752 KRT17Q04695 432 aa9□□□□□ -0.97
USP48-207ENST00000471752 SMC1AQ14683 1233 aaKnown RBP9□□□□□ -0.97
USP48-207ENST00000471752 PTPN14Q15678 1187 aa9□□□□□ -0.97
USP48-207ENST00000471752 C8orf34Q49A92 452 aa9□□□□□ -0.97
USP48-207ENST00000471752 GLB1LQ6UWU2 654 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms