RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 HTR3DQ70Z44 454 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 LRRTM3Q86VH5 581 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 GLB1L3Q8NCI6 653 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 GAB3Q8WWW8 586 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 CRAMP1Q96RY5 1269 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 FZD1Q9UP38 647 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 RAB11FIP3O75154 756 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 STC2O76061 302 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 GCP02774 474 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 POU3F2P20265 443 aaPredicted RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 CASRP41180 1078 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 GPR15P49685 360 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 NRG3P56975 720 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 DSG1Q02413 1049 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 METTL24Q5JXM2 366 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 LMBR1LQ6UX01 489 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 C16orf86Q6ZW13 317 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 TAS1R1Q7RTX1 841 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 RPUSD2Q8IZ73 545 aaKnown RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 UNC5BQ8IZJ1 945 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 PPP1R14CQ8TAE6 165 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 PROKR1Q8TCW9 393 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 UBXN4Q92575 508 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 APPBP2Q92624 585 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 LENG9Q96B70 501 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 ZNF496Q96IT1 587 aaPredicted RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 GPR101Q96P66 508 aaPredicted RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 AGAP2Q99490 1192 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 MTFR1LQ9H019 292 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 EIF2B4Q9UI10 523 aaKnown RBP5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 CD2APQ9Y5K6 639 aa5.02□□□□□ -1.61
PRPF40A-207ENST00000471701 ZNF891A8MT65 544 aaPredicted RBP5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 DNAJC6O75061 913 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 LY86O95711 162 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 ABHD16AO95870 558 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 ITGB1P05556 798 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 HSP90B1P14625 803 aaKnown RBP5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 KRT4P19013 534 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 DUSP2Q05923 314 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 FAM214AQ32MH5 1076 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 IQSEC1Q6DN90 963 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 KCNV1Q6PIU1 500 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 C11orf74Q86VG3 221 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 NINJ1Q92982 152 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 IL17RAQ96F46 866 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 RNPC3Q96LT9 517 aaKnown RBP5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 PDCD2LQ9BRP1 358 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 CLCA2Q9UQC9 943 aa5.01□□□□□ -1.61
PRPF40A-207ENST00000471701 GYPEP15421 78 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 LAG3P18627 525 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 BMP5P22003 454 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 GZMKP49863 264 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 WNT3AP56704 352 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 MRPL49Q13405 166 aaKnown RBP5□□□□□ -1.61
PRPF40A-207ENST00000471701 PCBP1Q15365 356 aaKnown RBP eCLIP5□□□□□ -1.61
PRPF40A-207ENST00000471701 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 CCDC178Q5BJE1 867 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 GPR158Q5T848 1215 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 MBNL2Q5VZF2 373 aaKnown RBP5□□□□□ -1.61
PRPF40A-207ENST00000471701 FRMD7Q6ZUT3 714 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 PPM1KQ8N3J5 372 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 ZNF610Q8N9Z0 462 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 RSAD2Q8WXG1 361 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 ENKD1Q9H0I2 346 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 NUMBLQ9Y6R0 609 aa5□□□□□ -1.61
PRPF40A-207ENST00000471701 PRSS38A1L453 326 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 TRIM24O15164 1050 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 TGM5O43548 720 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 IL2P60568 153 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 PHC1P78364 1004 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 MGAT5Q09328 741 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 VPS72Q15906 364 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 Q6ZPA2 131 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 VRK3Q8IV63 474 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 DHX37Q8IY37 1157 aaKnown RBP4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 NIM1KQ8IY84 436 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 OR2W6PQ8NHA6 318 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 NDC1Q9BTX1 674 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 ANO3Q9BYT9 981 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 CYP4F11Q9HBI6 524 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 SPON1Q9HCB6 807 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 FANCLQ9NW38 375 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 PACSIN3Q9UKS6 424 aa4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF40A-207ENST00000471701 GRXCR1A8MXD5 290 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 PRR5-ARHGAP8B1AHC4 643 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 PFKMP08237 780 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 CLEC2LP0C7M8 214 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 DPY19L2P1Q6NXN4 242 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 RHOUQ7L0Q8 258 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 SMC1BQ8NDV3 1235 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 CDC5LQ99459 802 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms