RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RIC8AQ9NPQ8 531 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 SH2B1Q9NRF2 756 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FBXO4Q9UKT5 387 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 NDRG2Q9UN36 371 aaKnown RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 SSX2IPQ9Y2D8 614 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 KMT2BQ9UMN6 2715 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 CEP250Q9BV73 2442 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 TPRP12270 2363 aaKnown RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 CARNS1A5YM72 827 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 TMEM150BA6NC51 233 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 NR1I2O75469 434 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 SOD2P04179 222 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 MCM5P33992 734 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 AFF1P51825 1210 aaKnown RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 IL31Q6EBC2 164 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF746Q6NUN9 644 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 TMTC3Q6ZXV5 915 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 KSR1Q8IVT5 923 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 FANCBQ8NB91 859 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 ING5Q8WYH8 240 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 RABGGTAQ92696 567 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 MAP3K14Q99558 947 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 NT5C3AQ9H0P0 336 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 RWDD1Q9H446 243 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 CHST12Q9NRB3 414 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 BMP2KQ9NSY1 1161 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 TBC1D22BQ9NU19 505 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 SUCLA2Q9P2R7 463 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 PCDHB2Q9Y5E7 798 aa7.74□□□□□ -1.17
HDAC1-204ENST00000471488 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-204ENST00000471488 ACACBO00763 2458 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 WDR64B1ANS9 1081 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 F8W810 466 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SH2B2O14492 632 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 NCAM2O15394 837 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 CCL16O15467 120 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 DHX15O43143 795 aaKnown RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 TGM5O43548 720 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 GDF9O60383 454 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SRGAP2CP0DJJ0 459 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 ITGA4P13612 1032 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SMARCA1P28370 1054 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SREBF1P36956 1147 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 RAB27AP51159 221 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 STARD6P59095 220 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 HDAC1Q13547 482 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 UGCGQ16739 394 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF528Q3MIS6 628 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 PPM1LQ5SGD2 360 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 LIN9Q5TKA1 542 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 MTSS1LQ765P7 747 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 CEP57Q86XR8 500 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 MB21D2Q8IYB1 491 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SMAP1Q8IYB5 467 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 TMTC2Q8N394 836 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 CMASQ8NFW8 434 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 HASPINQ8TF76 798 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 GJA10Q969M2 543 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF707Q96C28 371 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 PHF20Q9BVI0 1012 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 HERC2P3Q9BVR0 1158 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 PRKD2Q9BZL6 878 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 INO80BQ9C086 356 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 EPC1Q9H2F5 836 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 LTB4R2Q9NPC1 389 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 SLC2A4RGQ9NR83 387 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 DISC1Q9NRI5 854 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 HEBP1Q9NRV9 189 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 FAM217BQ9NTX9 383 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 STK39Q9UEW8 545 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 ANGPTL2Q9UKU9 493 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 V9GY48 417 aaPredicted RBP7.73□□□□□ -1.17
HDAC1-204ENST00000471488 MIA3Q5JRA6 1907 aa7.73□□□□□ -1.17
HDAC1-204ENST00000471488 MYH9P35579 1960 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF862O60290 1169 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 TBC1D4O60343 1298 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 GAS7O60861 476 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 NCLP19338 710 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 TARSP26639 723 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 MLH1P40692 756 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 SETQ01105 290 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 PFKPQ01813 784 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 PRKCQQ04759 706 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 MTAPQ13126 283 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 AP3B2Q13367 1082 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 SIM2Q14190 667 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 PPP2R5DQ14738 602 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 CCDC6Q16204 474 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 AASDHQ4L235 1098 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 DIEXFQ68CQ4 756 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 HEATR6Q6AI08 1181 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 PRSS55Q6UWB4 352 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 CYP26C1Q6V0L0 522 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF852Q6ZMS4 543 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms