RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 SMARCC2Q8TAQ2 1214 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 OSBP2Q969R2 916 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 RELTQ969Z4 430 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 Q96M66 194 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 BAG1Q99933 345 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 IQCGQ9H095 443 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 PPANQ9NQ55 473 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 VAV3Q9UKW4 847 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 ITM2BQ9Y287 266 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 CNPY2Q9Y2B0 182 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 ZMYM6O95789 1325 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 A0A087WWV3 80 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 MYO1BO43795 1136 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 GCP02774 474 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 TRIM21P19474 475 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 MAP4P27816 1152 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 HNRNPH1P31943 449 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 SCRN1Q12765 414 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 R3HDM1Q15032 1099 aaKnown RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 RAB3GAP1Q15042 981 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 GRIK4Q16099 956 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 PPM1JQ5JR12 505 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 RNF111Q6ZNA4 994 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 FAM47EQ6ZV65 393 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 CPLX4Q7Z7G2 160 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 AMIGO3Q86WK7 504 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 TMEM57Q8N5G2 664 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 FAM76AQ8TAV0 307 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.14□□□□□ -1.916e-8■□□□□ 8.3
CCNL1-214ENST00000471247 APPBP2Q92624 585 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 ERLEC1Q96DZ1 483 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 FERD3LQ96RJ6 166 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 DBNDD2Q9BQY9 259 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 MTA3Q9BTC8 594 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 HDAC8Q9BY41 377 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 TSGA10Q9BZW7 698 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 NDEL1Q9GZM8 345 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 SP110Q9HB58 689 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 TPCN1Q9ULQ1 816 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 MAPRE3Q9UPY8 281 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 TSC22D4Q9Y3Q8 395 aa3.14□□□□□ -1.91
CCNL1-214ENST00000471247 KIF26AQ9ULI4 1882 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-214ENST00000471247 RAD50Q92878 1312 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 LRRD1A4D1F6 860 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 DCDC2CA8MYV0 355 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 RNMTO43148 476 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CREB3O43889 395 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 DIAPH1O60610 1272 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 EFCAB14O75071 495 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CDKL5O76039 1030 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 SASH1O94885 1247 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 IGLV1-40P01703 118 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 GSNP06396 782 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 EEF2P13639 858 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 GNAT2P19087 354 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 MECP2P51608 486 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 SUMO1P63165 101 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 GNGT1P63211 74 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 FOXD4Q12950 439 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 HLTFQ14527 1009 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 ZYXQ15942 572 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 NKG7Q16617 165 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 C1orf141Q5JVX7 400 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 SPTY2D1Q68D10 685 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 HIBCHQ6NVY1 386 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 ZNF365Q70YC5 407 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 MAMDC2Q7Z304 686 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 C14orf80Q86SX3 495 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 FAM13CQ8NE31 585 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CEP70Q8NHQ1 597 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CDK5RAP3Q96JB5 506 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 HEXIM2Q96MH2 286 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 DHRS4Q9BTZ2 278 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 NKX2-4Q9H2Z4 354 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 GP6Q9HCN6 339 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 STK32BQ9NY57 414 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 TFCP2L1Q9NZI6 479 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 GTF2IRD1Q9UHL9 959 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 HDAC9Q9UKV0 1011 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 PAIP2BQ9ULR5 123 aaKnown RBP3.13□□□□□ -1.91
CCNL1-214ENST00000471247 FAM169AQ9Y6X4 670 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 DMDP11532 3685 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CHUKO15111 745 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CD247P20963 164 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 BMP8BP34820 402 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 ASPAP45381 313 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CORO7P57737 925 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 CUL4AQ13619 759 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 NR0B2Q15466 257 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 SNCBQ16143 134 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 FILIP1LQ4L180 1135 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 BMP2KLQ5H9B9 411 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 STYK1Q6J9G0 422 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 FAM173BQ6P4H8 233 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 PAOXQ6QHF9 649 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 SHISA2Q6UWI4 295 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 G2E3Q7L622 706 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 ATG9AQ7Z3C6 839 aa3.13□□□□□ -1.91
CCNL1-214ENST00000471247 LONP2Q86WA8 852 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms