RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ETV3LQ6ZN32 361 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 EPM2AIP1Q7L775 607 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-204ENST00000471245 KANSL1Q7Z3B3 1105 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 MYL10Q9BUA6 226 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 QRSL1Q9H0R6 528 aaKnown RBP7.22□□□□□ -1.25
CKS1B-204ENST00000471245 PRDM11Q9NQV5 511 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 KLHL14Q9P2G3 628 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 ARHGAP28Q9P2N2 729 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 USP32Q8NFA0 1604 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 SLIT2O94813 1529 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 ABCA3Q99758 1704 aa7.21□□□□□ -1.25
CKS1B-204ENST00000471245 TNS1Q9HBL0 1735 aaKnown RBP7.21□□□□□ -1.25
CKS1B-204ENST00000471245 PRSS38A1L453 326 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 PRAMEF22A3QJZ6 481 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 OR14I1A6ND48 311 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-204ENST00000471245 PLIN1O60240 522 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 MPIG6BO95866 241 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 MYL1P05976 194 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CLEC2LP0C7M8 214 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 SDHBP21912 280 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 AKAP5P24588 427 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 TXKP42681 527 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 SLC5A3P53794 718 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 ADKP55263 362 aaKnown RBP7.21□□□□□ -1.26
CKS1B-204ENST00000471245 YBX1P67809 324 aaKnown RBP7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CT83Q5H943 113 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 PITRM1Q5JRX3 1037 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
CKS1B-204ENST00000471245 TOR2AQ5JU69 321 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 PRAMEF18Q5VWM3 479 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 PRAMEF9Q5VWM5 478 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 OLFML2BQ68BL8 750 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 SLFN12LQ6IEE8 588 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CCDC62Q6P9F0 684 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CALML6Q8TD86 181 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 RSAD2Q8WXG1 361 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 EAF2Q96CJ1 260 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CLIP3Q96DZ5 547 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 ANO3Q9BYT9 981 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CSRNP2Q9H175 543 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 ARNT2Q9HBZ2 717 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 OBP2AQ9NY56 170 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 HCFC2Q9Y5Z7 792 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 NUMBLQ9Y6R0 609 aa7.21□□□□□ -1.26
CKS1B-204ENST00000471245 CLTCL1P53675 1640 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 ZNF839A8K0R7 811 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 VSTM5A8MXK1 200 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 PFKMP08237 780 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 MC4RP32245 332 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 SLC6A3Q01959 620 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 ADCY2Q08462 1091 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 MAP9Q49MG5 647 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 AUTS2Q8WXX7 1259 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 ZBTB21Q9ULJ3 1066 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 RGPD8O14715 1765 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-204ENST00000471245 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
CKS1B-204ENST00000471245 ASGR2P07307 311 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 ENO2P09104 434 aaPredicted RBP7.19□□□□□ -1.26
CKS1B-204ENST00000471245 HSPA6P17066 643 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 C5AR1P21730 350 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 GBX1Q14549 363 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 MUM1Q2TAK8 710 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 ZC3H18Q86VM9 953 aaKnown RBP7.19□□□□□ -1.26
CKS1B-204ENST00000471245 PROSER1Q86XN7 944 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 UNC5CLQ8IV45 518 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 CPA5Q8WXQ8 436 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 ALG3Q92685 438 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 KCTD10Q9H3F6 313 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 INCENPQ9NQS7 918 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 UCKL1Q9NWZ5 548 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 TMPRSS11EQ9UL52 423 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 DENND2AQ9ULE3 1009 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 EDARQ9UNE0 448 aa7.19□□□□□ -1.26
CKS1B-204ENST00000471245 NRAPQ86VF7 1730 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 MAFGO15525 162 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-204ENST00000471245 OSMP13725 252 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 THBS2P35442 1172 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 BCAR1P56945 870 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 NKX3-2P78367 333 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 UBE4AQ14139 1066 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 ANO4Q32M45 955 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
CKS1B-204ENST00000471245 VASNQ6EMK4 673 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 MIER2Q8N344 545 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 IGDCC4Q8TDY8 1250 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 RPGRQ92834 1020 aaKnown RBP7.18□□□□□ -1.26
CKS1B-204ENST00000471245 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 PITHD1Q9GZP4 211 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-204ENST00000471245 RNF38Q9H0F5 515 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 SLC12A5Q9H2X9 1139 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 ANLNQ9NQW6 1124 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 GALNT8Q9NY28 637 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 RCAN3Q9UKA8 241 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 NPHP3Q7Z494 1330 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 KIF1AQ12756 1690 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 PPLO60437 1756 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms