RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ANKRD40Q6AI12 368 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 ANO5Q75V66 913 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF720Q7Z2F6 126 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CCDC60Q8IWA6 550 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 DRC7Q8IY82 874 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 HLA-CQ95604 372 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CCDC51Q96ER9 411 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 SMARCAD1Q9H4L7 1026 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 DHX33Q9H6R0 707 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 MRPL44Q9H9J2 332 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 ATP6V0A4Q9HBG4 840 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CYP26B1Q9NR63 512 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 SAMSN1Q9NSI8 373 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 GABBR1Q9UBS5 961 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 YBX2Q9Y2T7 364 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 CHD9Q3L8U1 2897 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 GRIN2DO15399 1336 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 COL1A2P08123 1366 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 A6NJR5 290 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 N4BP3O15049 544 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 KIAA0391O15091 583 aaKnown RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 CETN3O15182 167 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 HIP1RO75146 1068 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 MYL3P08590 195 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 STAT5BP51692 787 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 COPB1P53618 953 aaKnown RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 STX17P56962 302 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 MCCD1P59942 119 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 IRX5P78411 483 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 GTF2BQ00403 316 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 SP2Q02086 613 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 DMP1Q13316 513 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 TARBP2Q15633 366 aaKnown RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 UGCGQ16739 394 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 XKR9Q5GH70 373 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 FAM47CQ5HY64 1035 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 FIGNQ5HY92 759 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 SWSAP1Q6NVH7 229 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 IRF2BP1Q8IU81 584 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 DAW1Q8N136 415 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 MICALL1Q8N3F8 863 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 OR6J1Q8NGC5 347 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 ATP8B4Q8TF62 1192 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 SLC7A3Q8WY07 619 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 CEP170P1Q96L14 293 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 FIZ1Q96SL8 496 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 GPR20Q99678 358 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 SRRTQ9BXP5 876 aaKnown RBP10.04□□□□□ -0.8
PTPRE-207ENST00000471218 EDEM3Q9BZQ6 932 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 GBP3Q9H0R5 595 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 WNT8AQ9H1J5 351 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 PDGFCQ9NRA1 345 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 PKD2L1Q9P0L9 805 aa10.04□□□□□ -0.8
PTPRE-207ENST00000471218 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 MCM3APO60318 1980 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 GSTTP1A0A1W2PQM5 241 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 HBP1O60381 514 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 PPFIA4O75335 1185 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 GCNT3O95395 438 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TCF7P36402 384 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 RABGGTBP53611 331 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 MAN2A1Q16706 1144 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 CNGA4Q8IV77 575 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TCP11Q8WWU5 503 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 SCLYQ96I15 445 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 IFT74Q96LB3 600 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 CNOT6LQ96LI5 555 aaKnown RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 SPATA33Q96N06 139 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 ACCSQ96QU6 501 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 ERGIC2Q96RQ1 377 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TUBGCP2Q9BSJ2 902 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
PTPRE-207ENST00000471218 KCND1Q9NSA2 647 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 INTS13Q9NVM9 706 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 ERAP1Q9NZ08 941 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 TBC1D7Q9P0N9 293 aa10.03□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF215Q9UL58 517 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms