RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 MEIS2O14770 477 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATP2A1O14983 1001 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATXN7O15265 892 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 SEPT4O43236 478 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 SLC37A4O43826 429 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 KIF5CO60282 957 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 PEX10O60683 326 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 DKK1O94907 266 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATG7O95352 703 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 GYPCP04921 128 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 POLR2MP0CAP2 368 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CYBAP13498 195 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 GAP43P17677 238 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 IGFBP4P22692 258 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ANXA13P27216 316 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 RPA1P27694 616 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CYLC1P35663 651 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CCT6AP40227 531 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 FKBP3Q00688 224 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 UBXN1Q04323 297 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ELOAQ14241 798 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 PLS1Q14651 629 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 KCTD2Q14681 263 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 MAN2A1Q16706 1144 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 RNFT1Q5M7Z0 435 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 FAM26FQ5R3K3 315 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 NCAPG2Q86XI2 1143 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 MYOCDQ8IZQ8 938 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 C17orf53Q8N3J3 647 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 MSL3Q8N5Y2 521 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ARRDC4Q8NCT1 418 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 NPLOC4Q8TAT6 608 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ETNPPLQ8TBG4 499 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ZDHHC1Q8WTX9 485 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATG4CQ96DT6 458 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 PNMA5Q96PV4 448 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 NUP88Q99567 741 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 TUBGCP2Q9BSJ2 902 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 POLR3CQ9BUI4 534 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 TSGA10Q9BZW7 698 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 PHACTR1Q9C0D0 580 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CPVLQ9H3G5 476 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 HAUS4Q9H6D7 363 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 TUFT1Q9NNX1 390 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 LUC7LQ9NQ29 371 aaKnown RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.24□□□□□ -1.418e-7■■■■■ 271.7
HDAC8-216ENST00000470998 ABHD10Q9NUJ1 306 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 BLOC1S4Q9NUP1 217 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ARGLU1Q9NWB6 273 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 TMEM260Q9NX78 707 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 FLRT1Q9NZU1 646 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 SEL1LQ9UBV2 794 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATXN7L1Q9ULK2 861 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 GDAQ9Y2T3 454 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 HCN4Q9Y3Q4 1203 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-216ENST00000470998 MYH1P12882 1939 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 CDK5RAP2Q96SN8 1893 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 PFASO15067 1338 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 ATP8B3O60423 1300 aa6.24□□□□□ -1.41
HDAC8-216ENST00000470998 DCDC2BA2VCK2 349 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 EFCAB8A8MWE9 144 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 EML1O00423 815 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 VWA5AO00534 786 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ADAMTS3O15072 1205 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 EIF3DO15371 548 aaKnown RBP eCLIP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 TRIM21P19474 475 aaKnown RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 CNGA1P29973 690 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 HNRNPH3P31942 346 aaKnown RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 CYP2C19P33261 490 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 SLC16A2P36021 539 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 STAT3P40763 770 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 MTIF2P46199 727 aaKnown RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 OAZ1P54368 228 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 STX17P56962 302 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ZBED6P86452 979 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ALCAMQ13740 583 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 TMEM132BQ14DG7 1078 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 NFIL3Q16649 462 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 UBE2SQ16763 222 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 LRIT3Q3SXY7 679 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 GLIPR1L2Q4G1C9 344 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ARHGAP29Q52LW3 1261 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 KIAA1755Q5JYT7 1200 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 TTBK2Q6IQ55 1244 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 XRRA1Q6P2D8 792 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 IRF2BP1Q8IU81 584 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 CLEC10AQ8IUN9 316 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 REXO1L1PQ8IX06 675 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ZC3H3Q8IXZ2 948 aaKnown RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 SMYD4Q8IYR2 804 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 C7orf61Q8IZ16 206 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 ZNF295-AS1Q8N0V1 137 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 SPICE1Q8N0Z3 855 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 SVOPQ8N4V2 548 aa6.23□□□□□ -1.41
HDAC8-216ENST00000470998 PRPF38AQ8NAV1 312 aaKnown RBP6.23□□□□□ -1.41
HDAC8-216ENST00000470998 KIAA0895Q8NCT3 520 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms