RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 CAGE1Q8TC20 777 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 ATP8B4Q8TF62 1192 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 LPIN2Q92539 896 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 MAP4K1Q92918 833 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 SUCLG2Q96I99 432 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 LSM14BQ9BX40 385 aaKnown RBP8.34□□□□□ -1.07
LDHB-206ENST00000470985 POMKQ9H5K3 350 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 DLGAP2Q9P1A6 1054 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 RIPK3Q9Y572 518 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 ADAMTS20P59510 1910 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 ABCA12Q86UK0 2595 aa8.34□□□□□ -1.07
LDHB-206ENST00000470985 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 EIF4E1BA6NMX2 242 aaKnown RBP8.33□□□□□ -1.08
LDHB-206ENST00000470985 GRM8O00222 908 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 CKBP12277 381 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 GLULP15104 373 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 SEPT2Q15019 361 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 PTGISQ16647 500 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 ABCB5Q2M3G0 1257 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 DOPEY1Q5JWR5 2465 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 SYCE2Q6PIF2 218 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 FBXO16Q8IX29 292 aaPredicted RBP8.33□□□□□ -1.08
LDHB-206ENST00000470985 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 TGFBRAP1Q8WUH2 860 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
LDHB-206ENST00000470985 NRSN2Q9GZP1 204 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 EPC1Q9H2F5 836 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
LDHB-206ENST00000470985 SEMA6CQ9H3T2 930 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 FBXL21Q9UKT6 434 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 ADAMTS5Q9UNA0 930 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 PLAGL2Q9UPG8 496 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 WASF3Q9UPY6 502 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 KALRNO60229 2985 aa8.33□□□□□ -1.08
LDHB-206ENST00000470985 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 F6X3S4 739 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
LDHB-206ENST00000470985 ADORA1P30542 326 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 LPAL2Q16609 132 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 COL28A1Q2UY09 1125 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 BEND3Q5T5X7 828 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 NFRKBQ6P4R8 1299 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 DBF4BQ8NFT6 615 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 TOP1MTQ969P6 601 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 NSUN4Q96CB9 384 aaKnown RBP8.32□□□□□ -1.08
LDHB-206ENST00000470985 NEK1Q96PY6 1258 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 FAM105AQ9NUU6 356 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 GNL3LQ9NVN8 582 aaKnown RBP8.32□□□□□ -1.08
LDHB-206ENST00000470985 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 GPN3Q9UHW5 284 aaPredicted RBP8.32□□□□□ -1.08
LDHB-206ENST00000470985 GMEB2Q9UKD1 530 aa8.32□□□□□ -1.08
LDHB-206ENST00000470985 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 VWA5AO00534 786 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 ARHGAP6O43182 974 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 NARSO43776 548 aaKnown RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 C1QL1O75973 258 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 ITGB1P05556 798 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 CNTN2Q02246 1040 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 RBL2Q08999 1139 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 ECM1Q16610 540 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 ANKRD54Q6NXT1 300 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 TAPT1Q6NXT6 567 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 EEPD1Q7L9B9 569 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 DDX1Q92499 740 aaKnown RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 TRIM56Q9BRZ2 755 aaKnown RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 IFIH1Q9BYX4 1025 aaKnown RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 ACSS3Q9H6R3 686 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 TLE6Q9H808 572 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 TBC1D17Q9HA65 648 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 SSU72Q9NP77 194 aaKnown RBP8.31□□□□□ -1.08
LDHB-206ENST00000470985 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
LDHB-206ENST00000470985 DUSP12Q9UNI6 340 aa8.31□□□□□ -1.08
LDHB-206ENST00000470985 CFAP46Q8IYW2 2715 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 WDR46O15213 610 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 LRRN2O75325 713 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 WEE2P0C1S8 567 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 ADMP35318 185 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 COPB2P35606 906 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 TECP42680 631 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms