RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 A0A087WZ62 844 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 A0A1W2PQ45 241 aaPredicted RBP10.68□□□□□ -0.7
CCM2-204ENST00000470837 A0A1W2PQY0 241 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 N4BP3O15049 544 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 GJB1P08034 283 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ATP1A3P13637 1013 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 KRT13P13646 458 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ZNF18P17022 549 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCM2-204ENST00000470837 GPC3P51654 580 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 PTENP60484 403 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 PRPF4BQ13523 1007 aaKnown RBP10.68□□□□□ -0.7
CCM2-204ENST00000470837 PCBP1Q15365 356 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCM2-204ENST00000470837 MTFR1Q15390 333 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 NFIL3Q16649 462 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 KIZQ2M2Z5 673 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 FKBP15Q5T1M5 1219 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ZPBP2Q6X784 338 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 SLC9A9Q8IVB4 645 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 XXYLT1Q8NBI6 393 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 PPP1R13LQ8WUF5 828 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 KCNN1Q92952 543 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ZNF668Q96K58 619 aaPredicted RBP10.68□□□□□ -0.7
CCM2-204ENST00000470837 FDXACB1Q9BRP7 624 aaPredicted RBP10.68□□□□□ -0.7
CCM2-204ENST00000470837 TMEM106CQ9BVX2 250 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 KIAA1586Q9HCI6 787 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 IFNKQ9P0W0 207 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ARMCX3Q9UH62 379 aaPredicted RBP10.68□□□□□ -0.7
CCM2-204ENST00000470837 PHF24Q9UPV7 400 aa10.68□□□□□ -0.7
CCM2-204ENST00000470837 ADGRA3Q8IWK6 1321 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 MYH9P35579 1960 aaKnown RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 ACKR2O00590 384 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 CLDN3O15551 220 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 TGFB1I1O43294 461 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 LDHAP00338 332 aaKnown RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 PTMAP06454 111 aaKnown RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 CAPN2P17655 700 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 GARTP22102 1010 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ZNF75DP51815 510 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ADAM17P78536 824 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ZNF200P98182 395 aaPredicted RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 TMEM62Q0P6H9 643 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 CCDC173Q0VFZ6 552 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 KRT31Q15323 416 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 RUFY4Q6ZNE9 571 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 FRMD5Q7Z6J6 570 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 C12orf56Q8IXR9 622 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 FAM186BQ8IYM0 893 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ZNF333Q96JL9 665 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 PRIMPOLQ96LW4 560 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 MED15Q96RN5 788 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 TUBGCP2Q9BSJ2 902 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 MKNK1Q9BUB5 465 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 MSTO1Q9BUK6 570 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 NOC4LQ9BVI4 516 aaKnown RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 PCIF1Q9H4Z3 704 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 TAB2Q9NYJ8 693 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 ANKFY1Q9P2R3 1169 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 LIMA1Q9UHB6 759 aaKnown RBP10.67□□□□□ -0.7
CCM2-204ENST00000470837 OGDHLQ9ULD0 1010 aa10.67□□□□□ -0.7
CCM2-204ENST00000470837 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCM2-204ENST00000470837 MROH7Q68CQ1 1323 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 ARVCFO00192 962 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 TLR3O15455 904 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 STX10O60499 249 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 TOM1L1O75674 476 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 PIGRP01833 764 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 TPM1P09493 284 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 EIF4BP23588 611 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 HOXC8P31273 242 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 HOXD13P35453 343 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 THPOP40225 353 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 COPB1P53618 953 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 CRYBB1P53674 252 aaPredicted RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 MBTD1Q05BQ5 628 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 PTK7Q13308 1070 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 MAN2A1Q16706 1144 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 KYAT1Q16773 422 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 FAM187BQ17R55 369 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 ATF7IP2Q5U623 682 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 LRRC55Q6ZSA7 311 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 INTS8Q75QN2 995 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
CCM2-204ENST00000470837 IFNLR1Q8IU57 520 aaPredicted RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 U2AF1L4Q8WU68 220 aaKnown RBP10.66□□□□□ -0.7
CCM2-204ENST00000470837 ARMC5Q96C12 935 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms