RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 SEPT9Q9UHD8 586 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 DEPTORQ8TB45 409 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 GABBR1Q9UBS5 961 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 MYH4Q9Y623 1939 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 NMT1P30419 496 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SNAPC2Q13487 334 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SLFN12LQ6IEE8 588 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC5A4Q9NY91 659 aa7.55□□□□□ -1.2
GAPVD1-215ENST00000470056 TGFB3P10600 412 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 TAL1P17542 331 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 CNGA1P29973 690 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 EMBQ6PCB8 327 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC35F6Q8N357 371 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 PCDHA13Q9Y5I0 950 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 MACROD2A1Z1Q3 448 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 ASB14A6NK59 587 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 VGLL4Q14135 290 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 MTF1Q14872 753 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 C12orf56Q8IXR9 622 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 TUBB6Q9BUF5 446 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 AGPAT3Q9NRZ7 376 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 CAPN7Q9Y6W3 813 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 COL4A5P29400 1685 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 GAS8O95995 478 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 EGFRP00533 1210 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 RARRES1P49788 294 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 OTUD5Q96G74 571 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 MROH8Q9H579 483 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 ELP3Q9H9T3 547 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 A1CFQ9NQ94 594 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 ADAMTS5Q9UNA0 930 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 CLIC2O15247 247 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 EPHB4P54760 987 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 GPR162Q16538 588 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 TRIM65Q6PJ69 517 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 CHUKO15111 745 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 GFM2Q969S9 779 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 SELENOSQ9BQE4 189 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 AGPAT5Q9NUQ2 364 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 HYOU1Q9Y4L1 999 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 DDNO94850 711 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 EPHX2P34913 555 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 ITGB3BPQ13352 177 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 EAPPQ56P03 285 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 TCP11Q8WWU5 503 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 PSME4Q14997 1843 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 IGSF9BQ9UPX0 1349 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 LGSNQ5TDP6 509 aa7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-215ENST00000470056 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 LDHAP00338 332 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SP4Q02446 784 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TMEM132BQ14DG7 1078 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 PRAMEF18Q5VWM3 479 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 PPP1R2P3Q6NXS1 205 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 VSIG1Q86XK7 387 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 GABPB2Q8TAK5 448 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC10A4Q96EP9 437 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 KIF13BQ9NQT8 1826 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 HNRNPDLO14979 420 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ICAM3P32942 547 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MAN1A1P33908 653 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 LIG4P49917 911 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 DEUP1Q05D60 604 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 BFSP1Q12934 665 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TFDP1Q14186 410 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 B3GNT9Q6UX72 402 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ZBTB8OSQ8IWT0 167 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 IL31RAQ8NI17 732 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 P2RX7Q99572 595 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 COL20A1Q9P218 1284 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ENPEPQ07075 957 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 LBX2Q6XYB7 198 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ANKRD7Q92527 254 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 FNBP1Q96RU3 617 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 NCAPGQ9BPX3 1015 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 IMPG2Q9BZV3 1241 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ASTN1O14525 1302 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ASTN2O75129 1339 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 RSPH10B2B2RC85 870 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 USP2O75604 605 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 NEBLO76041 1014 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SUPT20HL2P0C7V6 817 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms