RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
TOP3A-203ENST00000469739 TSEN2Q8NCE0 465 aaKnown RBP10.21□□□□□ -0.77
TOP3A-203ENST00000469739 BSNDQ8WZ55 320 aa10.21□□□□□ -0.77
TOP3A-203ENST00000469739 PAGR1Q9BTK6 254 aa10.21□□□□□ -0.77
TOP3A-203ENST00000469739 CELF4Q9BZC1 486 aaKnown RBP10.21□□□□□ -0.77
TOP3A-203ENST00000469739 THAP2Q9H0W7 228 aa10.21□□□□□ -0.77
TOP3A-203ENST00000469739 HSPBP1Q9NZL4 362 aa10.21□□□□□ -0.77
TOP3A-203ENST00000469739 DENND3A2RUS2 1198 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 ANKRD62A6NC57 917 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 ADRB2P07550 413 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 TRAF1Q13077 416 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 TNFAIP1Q13829 316 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 MOB2Q70IA6 237 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 ANO5Q75V66 913 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 VPS36Q86VN1 386 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM143Q96AN5 459 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.78
TOP3A-203ENST00000469739 PXMP2Q9NR77 195 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 HPCAL4Q9UM19 191 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 NR2E1Q9Y466 385 aa10.21□□□□□ -0.78
TOP3A-203ENST00000469739 PJA2O43164 708 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 ARHGAP27Q6ZUM4 889 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 MCF2L2Q86YR7 1114 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 SH2D3CQ8N5H7 860 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 SLC30A5Q8TAD4 765 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 SLC35G2Q8TBE7 412 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 HNRNPLLQ8WVV9 542 aaKnown RBP10.2□□□□□ -0.78
TOP3A-203ENST00000469739 BORCS6Q96GS4 357 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 RIT2Q99578 217 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 DPH5Q9H2P9 285 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 STIM2Q9P246 746 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 CYP26A1O43174 497 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 RAD51CO43502 376 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF862O60290 1169 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 TBC1D12O60347 775 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
TOP3A-203ENST00000469739 PPFIA4O75335 1185 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 KRT14P02533 472 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 SOX5P35711 763 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 VAMP7P51809 220 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 BACE1P56817 501 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 LLGL2Q6P1M3 1020 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 WDR93Q6P2C0 686 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 STXBP4Q6ZWJ1 553 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 METTL13Q8N6R0 699 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 POMGNT1Q8WZA1 660 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 IQCDQ96DY2 449 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 EDEM3Q9BZQ6 932 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 KIAA1683Q9H0B3 1180 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 KIAA1522Q9P206 1035 aaPredicted RBP10.2□□□□□ -0.78
TOP3A-203ENST00000469739 AMACRQ9UHK6 382 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 GOLGA6BA6NDN3 693 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 HNRNPDLO14979 420 aaKnown RBP10.2□□□□□ -0.78
TOP3A-203ENST00000469739 BMT2Q1RMZ1 405 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 MEI1Q5TIA1 1274 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 DAB2IPQ5VWQ8 1189 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 ZBTB10Q96DT7 871 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 APEX2Q9UBZ4 518 aa10.2□□□□□ -0.78
TOP3A-203ENST00000469739 CTNND1O60716 968 aaKnown RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ERLIN2O94905 339 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SGPL1O95470 568 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SYF2O95926 243 aaKnown RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 KRT5P13647 590 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 PTPRAP18433 802 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 MARK3P27448 753 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 NPTX2P47972 431 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ACOT2P49753 483 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ATP1A2P50993 1020 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SF3A3Q12874 501 aaKnown RBP eCLIP10.19□□□□□ -0.782e-6■■■■□ 21.4
TOP3A-203ENST00000469739 MAP9Q49MG5 647 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 PCNX4Q63HM2 1172 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 OR2W6PQ8NHA6 318 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 TPCN2Q8NHX9 752 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 CTNNBL1Q8WYA6 563 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 FAM213AQ9BRX8 229 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 KMT5AQ9NQR1 393 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 CTTNBP2NLQ9P2B4 639 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 PPME1Q9Y570 386 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 UBIAD1Q9Y5Z9 338 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 KRIT1O00522 736 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 EIF3DO15371 548 aaKnown RBP eCLIP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 KIF4AO95239 1232 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 PLS3P13797 630 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 CNGA1P29973 690 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ADSSP30520 456 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 NF2P35240 595 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 MARCKSL1P49006 195 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 MESDQ14696 234 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SCARA3Q6AZY7 606 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SLC47A2Q86VL8 602 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 CCDC60Q8IWA6 550 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ZC3H3Q8IXZ2 948 aaKnown RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ANKRD35Q8N283 1001 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 RNF10Q8N5U6 811 aaKnown RBP10.19□□□□□ -0.78
TOP3A-203ENST00000469739 XXYLT1Q8NBI6 393 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 SYN2Q92777 582 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms