RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 SH2D3AQ9BRG2 576 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 TEKT3Q9BXF9 490 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 DPP7Q9UHL4 492 aa20.51■□□□□ 0.87
TTC28-205ENST00000469670 NRP1O14786 923 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 MYBP10242 640 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 AFF1P51825 1210 aaKnown RBP20.5■□□□□ 0.87
TTC28-205ENST00000469670 RCAN1P53805 252 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 KSR1Q8IVT5 923 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 SLC5A5Q92911 643 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 NLRP4Q96MN2 994 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 HERC2P3Q9BVR0 1158 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 RSAD1Q9HA92 442 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 DLL3Q9NYJ7 618 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 DLGAP2Q9P1A6 1054 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 KANSL3Q9P2N6 904 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
TTC28-205ENST00000469670 SSX2IPQ9Y2D8 614 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 SIT1Q9Y3P8 196 aa20.5■□□□□ 0.87
TTC28-205ENST00000469670 TEX28O15482 410 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 EDIL3O43854 480 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 RFPL2O75678 378 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 STBD1O95210 358 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 GLUD1P00367 558 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 POMCP01189 267 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 TAS1R1Q7RTX1 841 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 MIER3Q7Z3K6 550 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 MRPL10Q7Z7H8 261 aaKnown RBP20.49■□□□□ 0.87
TTC28-205ENST00000469670 C1orf210Q8IVY1 113 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 DCLK2Q8N568 766 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 RDM1Q8NG50 284 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 SMG7Q92540 1137 aaKnown RBP20.49■□□□□ 0.87
TTC28-205ENST00000469670 GJA10Q969M2 543 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 ARHGEF3Q9NR81 526 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 AGPAT5Q9NUQ2 364 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 CNTNAP2Q9UHC6 1331 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 NCOR2Q9Y618 2525 aa20.49■□□□□ 0.87
TTC28-205ENST00000469670 C2orf16Q68DN1 1984 aa20.48■□□□□ 0.87
TTC28-205ENST00000469670 MAFO75444 373 aaPredicted RBP20.48■□□□□ 0.87
TTC28-205ENST00000469670 BICD2Q8TD16 824 aa20.48■□□□□ 0.87
TTC28-205ENST00000469670 MARCH5Q9NX47 278 aa20.48■□□□□ 0.87
TTC28-205ENST00000469670 PRG3Q9Y2Y8 225 aaPredicted RBP20.48■□□□□ 0.87
TTC28-205ENST00000469670 CCDC196A0A1B0GTZ2 297 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 GLUD2P49448 558 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 USP11P51784 963 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 DCLRE1AQ6PJP8 1040 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 ZNF707Q96C28 371 aaPredicted RBP20.47■□□□□ 0.87
TTC28-205ENST00000469670 PIDD1Q9HB75 910 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 RXFP1Q9HBX9 757 aa20.47■□□□□ 0.87
TTC28-205ENST00000469670 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 PRPF3O43395 683 aaKnown RBP20.46■□□□□ 0.87
TTC28-205ENST00000469670 PSMD10O75832 226 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 LAMP2P13473 410 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 ADCK5Q3MIX3 580 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 KIAA0319Q5VV43 1072 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 HDAC7Q8WUI4 952 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 JPH2Q9BR39 696 aaPredicted RBP20.46■□□□□ 0.87
TTC28-205ENST00000469670 SLC2A4RGQ9NR83 387 aa20.46■□□□□ 0.87
TTC28-205ENST00000469670 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.46■□□□□ 0.87
TTC28-205ENST00000469670 POTEMA6NI47 508 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 ANHXE9PGG2 379 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 PAPLNO95428 1278 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 SPATA31D3P0C874 917 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 GLULP15104 373 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 OR1G1P47890 313 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 HTR4Q13639 388 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 RSPO4Q2I0M5 234 aaPredicted RBP20.45■□□□□ 0.86
TTC28-205ENST00000469670 UBXN11Q5T124 520 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 POTEGQ6S5H5 508 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 SPATA31D4Q6ZUB0 917 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 GET4Q7L5D6 327 aaPredicted RBP20.45■□□□□ 0.86
TTC28-205ENST00000469670 COLGALT2Q8IYK4 626 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 RNF168Q8IYW5 571 aaPredicted RBP20.45■□□□□ 0.86
TTC28-205ENST00000469670 SUMF1Q8NBK3 374 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 PJA1Q8NG27 643 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 FOXQ1Q9C009 403 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 NT5C3AQ9H0P0 336 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 COL4A3BPQ9Y5P4 624 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 OTOGLQ3ZCN5 2332 aa20.45■□□□□ 0.86
TTC28-205ENST00000469670 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
TTC28-205ENST00000469670 EFEMP2O95967 443 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 DSG1Q02413 1049 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 PLA2G4FQ68DD2 849 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 B3GNT9Q6UX72 402 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 ANO5Q75V66 913 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 PALB2Q86YC2 1186 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 RASEFQ8IZ41 740 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 ST13P5Q8NFI4 369 aaPredicted RBP20.44■□□□□ 0.86
TTC28-205ENST00000469670 CCDC148Q8NFR7 591 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 PLEKHA4Q9H4M7 779 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 ZDHHC7Q9NXF8 308 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 NUMBLQ9Y6R0 609 aa20.44■□□□□ 0.86
TTC28-205ENST00000469670 FRYLO94915 3013 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 CEP250Q9BV73 2442 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 GAS2O43903 313 aaKnown RBP20.43■□□□□ 0.86
TTC28-205ENST00000469670 NCLP19338 710 aaKnown RBP20.43■□□□□ 0.86
TTC28-205ENST00000469670 HOXA11P31270 313 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms