RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KRT26Q7Z3Y9 468 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 ZNF804AQ7Z570 1209 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 FILIP1Q7Z7B0 1213 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 RNF180Q86T96 592 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 DDX53Q86TM3 631 aaKnown RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 PNMA8AQ86V59 439 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 PPM1KQ8N3J5 372 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 SEC14L1Q92503 715 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 CELF1Q92879 486 aaKnown RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 DDX19BQ9UMR2 479 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 MAPRE3Q9UPY8 281 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 TNRC6CQ9HCJ0 1690 aaKnown RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 SLX4Q8IY92 1834 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 KIAA1551Q9HCM1 1747 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 TCRBV5S4A2TA0A5A2 114 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 OR14I1A6ND48 311 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 NUDT19A8MXV4 375 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 F8W031 263 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 H7C1D1 291 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 PLIN1O60240 522 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 AMY2AP04746 511 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 IFIT1P09914 478 aaKnown RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 TRIM27P14373 513 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 PDE6AP16499 860 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 AMY2BP19961 511 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 MAPKAPK2P49137 400 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 DNM2P50570 870 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 MECP2P51608 486 aaKnown RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 KIAA2012Q0VF49 1180 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 RAB3GAP1Q15042 981 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 PIK3R6Q5UE93 754 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 STEAP3Q658P3 488 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 UBE2R2Q712K3 238 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 GPC2Q8N158 579 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 SH3RF2Q8TEC5 729 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 LIN37Q96GY3 246 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 PEX11GQ96HA9 241 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 BICC1Q9H694 974 aaKnown RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 CATSPERZQ9NTU4 200 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 GNL3LQ9NVN8 582 aaKnown RBP7.59□□□□□ -1.19
PTCD3-208ENST00000469585 HCFC2Q9Y5Z7 792 aa7.59□□□□□ -1.19
PTCD3-208ENST00000469585 UTYO14607 1347 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 M0R2C6 588 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CBX4O00257 560 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 HGSO14964 777 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 KPNA6O60684 536 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CSF1RP07333 972 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 NBPF7P0C2Y1 421 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 SLC5A1P13866 664 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 NEK4P51957 841 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 GPSM2P81274 684 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 G3BP1Q13283 466 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 GPR19Q15760 415 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CRY1Q16526 586 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 HSP90AB4PQ58FF6 505 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 GORABQ5T7V8 394 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CIAPIN1Q6FI81 312 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CYP4F22Q6NT55 531 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 OSTM1Q86WC4 334 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 AHI1Q8N157 1196 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CISD2Q8N5K1 135 aaKnown RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 UHMK1Q8TAS1 419 aaKnown RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 SUCLG2Q96I99 432 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 WNK4Q96J92 1243 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 RTFDC1Q9BY42 306 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 ZNF552Q9H707 407 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 CAAP1Q9H8G2 361 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 HACL1Q9UJ83 578 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 NUDT5Q9UKK9 219 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 HDAC9Q9UKV0 1011 aa7.58□□□□□ -1.2
PTCD3-208ENST00000469585 DDX60Q8IY21 1712 aaKnown RBP7.58□□□□□ -1.2
PTCD3-208ENST00000469585 ZNF804BA4D1E1 1349 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 MYO3BQ8WXR4 1341 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 HRKO00198 91 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 TRAF5O00463 557 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 KRIT1O00522 736 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 ECE2O60344 883 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 RPS12P25398 132 aaKnown RBP7.57□□□□□ -1.2
PTCD3-208ENST00000469585 MMP14P50281 582 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 JAM2P57087 298 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 PRR5P85299 388 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 CHRNDQ07001 517 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 SEPT7Q16181 437 aaKnown RBP7.57□□□□□ -1.2
PTCD3-208ENST00000469585 PLEKHN1Q494U1 663 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-208ENST00000469585 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 ARHGAP36Q6ZRI8 547 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 SMC1BQ8NDV3 1235 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 TBC1D16Q8TBP0 767 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 CHAC2Q8WUX2 184 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 COA1Q9GZY4 146 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 USP44Q9H0E7 712 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms