RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 IGSF21Q96ID5 467 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 PRRX2Q99811 253 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 HSD17B14Q9BPX1 270 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 ZBP1Q9H171 429 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 RSAD1Q9HA92 442 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 TBC1D13Q9NVG8 400 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 WRAP73Q9P2S5 460 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 HCFC2Q9Y5Z7 792 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 GABBR2O75899 941 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 GALTP07902 379 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 SRGAP2CP0DJJ0 459 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 PBX3P40426 434 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 PTENP60484 403 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 NR5A1Q13285 461 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 EARS2Q5JPH6 523 aaKnown RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 NOTUMQ6P988 496 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 SYCE2Q6PIF2 218 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 DIS3L2Q8IYB7 885 aaKnown RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 VPS52Q8N1B4 723 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 TMEM143Q96AN5 459 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 RIPOR3Q96MK2 946 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 CCDC43Q96MW1 224 aaKnown RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 NRDE2Q9H7Z3 1164 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-204ENST00000469504 RGL1Q9NZL6 768 aa12.22□□□□□ -0.45
COL4A3-204ENST00000469504 INPPL1O15357 1258 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
COL4A3-204ENST00000469504 CXCL14O95715 111 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 ALDH2P05091 517 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 HOXA11P31270 313 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-204ENST00000469504 MTHFRP42898 656 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 NEK4P51957 841 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 ZXDAP98168 799 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 CYP4A11Q02928 519 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 SIGLEC14Q08ET2 396 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 CTTNQ14247 550 aaKnown RBP12.21□□□□□ -0.45
COL4A3-204ENST00000469504 AGMOQ6ZNB7 445 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 TRIM67Q6ZTA4 783 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 RPGRIP1Q96KN7 1286 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 MTMR9Q96QG7 549 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 LLPHQ9BRT6 129 aaKnown RBP12.21□□□□□ -0.45
COL4A3-204ENST00000469504 EMILIN2Q9BXX0 1053 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 GJB4Q9NTQ9 266 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 INPP5FQ9Y2H2 1132 aa12.21□□□□□ -0.45
COL4A3-204ENST00000469504 PIEZO1Q92508 2521 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-204ENST00000469504 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 NR1I2O75469 434 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 C1RP00736 705 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 MUTP22033 750 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 RARRES1P49788 294 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 LLGL2Q6P1M3 1020 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 ELMSAN1Q6PJG2 1045 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
COL4A3-204ENST00000469504 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 LPPQ93052 612 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 PRIMPOLQ96LW4 560 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 MINDY3Q9H8M7 445 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 XPNPEP1Q9NQW7 623 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 USTQ9Y2C2 406 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 MUC6Q6W4X9 2439 aa12.2□□□□□ -0.46
COL4A3-204ENST00000469504 TMEM221A6NGB7 291 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 M0R296 226 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 TSPAN1O60635 241 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 LARGE1O95461 756 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 ITGA4P13612 1032 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 CA8P35219 290 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 ARL2P36404 184 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 TXKP42681 527 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 SLC11A1P49279 550 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 NUBP1P53384 320 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
COL4A3-204ENST00000469504 RBM10P98175 930 aaKnown RBP12.19□□□□□ -0.46
COL4A3-204ENST00000469504 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 UBXN11Q5T124 520 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 SUGP1Q8IWZ8 645 aaKnown RBP12.19□□□□□ -0.46
COL4A3-204ENST00000469504 GPR65Q8IYL9 337 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 ERMNQ8TAM6 284 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 CSRNP2Q9H175 543 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms