RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 RARBP10826 455 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 PDIK1LQ8N165 341 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 MKNK1Q9BUB5 465 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 EMSYQ7Z589 1322 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 EIF3DO15371 548 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 CYP2B6P20813 491 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 GNA15P30679 374 aa16.11■□□□□ 0.17
LIMS2-213ENST00000469300 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 RYBPQ8N488 228 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 SUDS3Q9H7L9 328 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-213ENST00000469300 RPLP2P05387 115 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 KRT7P08729 469 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 GLE1Q53GS7 698 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 SCN4BQ8IWT1 228 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 RILPQ96NA2 401 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 KLHL14Q9P2G3 628 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 PPARGP37231 505 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 FCGRTP55899 365 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 RBP5P82980 135 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 PRKCEQ02156 737 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 EMC2Q15006 297 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 DGKDQ16760 1214 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 FAM217BQ9NTX9 383 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 NMT1P30419 496 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 TXNRD3Q86VQ6 643 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 KCNH7Q9NS40 1196 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 LIMA1Q9UHB6 759 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 CPT1AP50416 773 aa16.1■□□□□ 0.17
LIMS2-213ENST00000469300 BASP1P80723 227 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
LIMS2-213ENST00000469300 CCDC151A5D8V7 595 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 A8MXQ7 604 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 RGS2P41220 211 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 ZNF131P52739 623 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 PLTPP55058 493 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 DYNLT1P63172 113 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 NAA30Q147X3 362 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-213ENST00000469300 MID2Q9UJV3 735 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 DPYDQ12882 1025 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 CUL1Q13616 776 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 REEP2Q9BRK0 252 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 MRIQ9BWK5 157 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 SLITRK6Q9H5Y7 841 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 GBA2Q9HCG7 927 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-213ENST00000469300 IP6K2Q9UHH9 426 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 CXCL11O14625 94 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 IL18RAPO95256 599 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 S100BP04271 92 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-213ENST00000469300 PEX19P40855 299 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 LIG3P49916 1009 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 TPD52P55327 224 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-213ENST00000469300 VEPH1Q14D04 833 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
LIMS2-213ENST00000469300 SNX1Q13596 522 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 IDI2Q9BXS1 227 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 CACYBPQ9HB71 228 aaKnown RBP16.08■□□□□ 0.17
LIMS2-213ENST00000469300 SLC38A7Q9NVC3 462 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 ZBBXA8MT70 800 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 SOX5P35711 763 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 EPHB1P54762 984 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 DR1Q01658 176 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 THOC5Q13769 683 aaKnown RBP16.08■□□□□ 0.17
LIMS2-213ENST00000469300 C4orf50Q6ZRC1 276 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 C11orf70Q9BRQ4 267 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 POLD4Q9HCU8 107 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 TUBE1Q9UJT0 475 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 SYNPO2Q9UMS6 1093 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.17
LIMS2-213ENST00000469300 GOLGA8QA0A0J9YX86 632 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 GOLGA8OA6NCC3 632 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 GOLGA8NF8WBI6 632 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 M0QYV0 167 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 CD4P01730 458 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 CAPN12Q6ZSI9 719 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 RAB44Q7Z6P3 723 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-213ENST00000469300 ACER1Q8TDN7 264 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 KIF9Q9HAQ2 790 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 MSH2P43246 934 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 EIF3BP55884 814 aaKnown RBP16.08■□□□□ 0.16
LIMS2-213ENST00000469300 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
LIMS2-213ENST00000469300 GSTA1P08263 222 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 GSTA2P09210 222 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
LIMS2-213ENST00000469300 ICE2Q659A1 982 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms