RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 UBXN11Q5T124 520 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 SLC7A3Q8WY07 619 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 TMEM143Q96AN5 459 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 CEP170P1Q96L14 293 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-207ENST00000469093 DHX33Q9H6R0 707 aaKnown RBP13.71□□□□□ -0.21
COL5A1-207ENST00000469093 KCNMB3Q9NPA1 279 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
COL5A1-207ENST00000469093 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 DKC1O60832 514 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 KLRC2P26717 231 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 CLCN4P51793 760 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 LAMTOR4Q0VGL1 99 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 STK3Q13188 491 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 C4orf19Q8IY42 314 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 EXOC8Q8IYI6 725 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
COL5A1-207ENST00000469093 HAS1Q92839 578 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 TMEM175Q9BSA9 504 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 PHF20Q9BVI0 1012 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 EMILIN2Q9BXX0 1053 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
COL5A1-207ENST00000469093 PROB1E7EW31 1015 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 NRP1O14786 923 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 ZBTB39O15060 712 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 POMCP01189 267 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 SSBP05455 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL5A1-207ENST00000469093 YWHABP31946 246 aaKnown RBP13.69□□□□□ -0.22
COL5A1-207ENST00000469093 RFC5P40937 340 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 EPHA7Q15375 998 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-207ENST00000469093 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 FAM193BQ96PV7 902 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-207ENST00000469093 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
COL5A1-207ENST00000469093 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 RGL1Q9NZL6 768 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 PPME1Q9Y570 386 aa13.69□□□□□ -0.22
COL5A1-207ENST00000469093 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 CCDC194A0A1B0GVG4 234 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 TBX3O15119 743 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 ASAP2O43150 1006 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
COL5A1-207ENST00000469093 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
COL5A1-207ENST00000469093 CLCN5P51795 746 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 SMG8Q8ND04 991 aaKnown RBP13.68□□□□□ -0.22
COL5A1-207ENST00000469093 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-207ENST00000469093 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-207ENST00000469093 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
COL5A1-207ENST00000469093 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
COL5A1-207ENST00000469093 DTNBO60941 627 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 EFEMP2O95967 443 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 SOD2P04179 222 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 SCRN1Q12765 414 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 TDGQ13569 410 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 CTTNQ14247 550 aaKnown RBP13.67□□□□□ -0.22
COL5A1-207ENST00000469093 XKR9Q5GH70 373 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 CCDC149Q6ZUS6 474 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 CNNM3Q8NE01 707 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 TCP11Q8WWU5 503 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 GAD1Q99259 594 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 LXNQ9BS40 222 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 ZSWIM4Q9H7M6 989 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 KCNK12Q9HB15 430 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 MARCH5Q9NX47 278 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
COL5A1-207ENST00000469093 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 C2CD2LO14523 706 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 INPPL1O15357 1258 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 PI15O43692 258 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms