RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 SMRP1Q8NCR6 262 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 FBXO18Q8NFZ0 1043 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 ASAP3Q8TDY4 903 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 AUTS2Q8WXX7 1259 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 FAM193BQ96PV7 902 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 KIF2CQ99661 725 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 C11orf16Q9NQ32 467 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 SH2B1Q9NRF2 756 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 DNAJB4Q9UDY4 337 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 C5orf42Q9H799 3197 aa11.83□□□□□ -0.52
TGFBR3-205ENST00000468996 KIAA1671Q9BY89 1806 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 FSD2A1L4K1 749 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 C2orf71A6NGG8 1288 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 MED24O75448 989 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 GALTP07902 379 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 OR52Z1P0C646 297 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 SPATA31C1P0DKV0 1188 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 ARL2P36404 184 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 RARRES1P49788 294 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 TTC38Q5R3I4 469 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 UBXN11Q5T124 520 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 ANKRD54Q6NXT1 300 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 RNF135Q8IUD6 432 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 ERMNQ8TAM6 284 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 APOL6Q9BWW8 343 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 RSAD1Q9HA92 442 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 TUFT1Q9NNX1 390 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 GPRC5CQ9NQ84 441 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 KANSL3Q9P2N6 904 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 MUTYHQ9UIF7 546 aa11.82□□□□□ -0.52
TGFBR3-205ENST00000468996 PLXNA4Q9HCM2 1894 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 LRRIQ4A6NIV6 560 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 TSPAN1O60635 241 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 DDHD2O94830 711 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 GLRA2P23416 452 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 SLC11A1P49279 550 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 CAPSQ13938 189 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 NBR1Q14596 966 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 TMEM184AQ6ZMB5 413 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 DDX53Q86TM3 631 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 NOSTRINQ8IVI9 506 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 SMG8Q8ND04 991 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 BCL7CQ8WUZ0 217 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 GAD1Q99259 594 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 CSRNP2Q9H175 543 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 NOL7Q9UMY1 257 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 FAN1Q9Y2M0 1017 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 HES2Q9Y543 173 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 IPPQ9Y573 584 aa11.81□□□□□ -0.52
TGFBR3-205ENST00000468996 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 CARNS1A5YM72 827 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 ARL5CA6NH57 179 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 B4GALT5O43286 388 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 B4GALT3O60512 393 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 ARF4P18085 180 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 LIG1P18858 919 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 NCLP19338 710 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 AXLP30530 894 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 POU5F1BQ06416 359 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 MCTP1Q6DN14 999 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 SYCE2Q6PIF2 218 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 CASP10Q92851 521 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 S1PR5Q9H228 398 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 UBN1Q9NPG3 1134 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 HCFC2Q9Y5Z7 792 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 CNTNAP2Q9UHC6 1331 aa11.8□□□□□ -0.52
TGFBR3-205ENST00000468996 PRR33A8MZF0 331 aa11.79□□□□□ -0.52
TGFBR3-205ENST00000468996 NRP1O14786 923 aa11.79□□□□□ -0.52
TGFBR3-205ENST00000468996 ST18O60284 1047 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms