RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ACKR2O00590 384 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 PLS3P13797 630 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 NPTX2P47972 431 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 PEX3P56589 373 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 MAPK7Q13164 816 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 MCM6Q14566 821 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 EPC2Q52LR7 807 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 ARSHQ5FYA8 562 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 NLRC5Q86WI3 1866 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 HACE1Q8IYU2 909 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 SPIRE2Q8WWL2 714 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 PLVAPQ9BX97 442 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 TMEM134Q9H6X4 195 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 CERS4Q9HA82 394 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 KMT5AQ9NQR1 393 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 CNTNAP2Q9UHC6 1331 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 C5orf67F2Z3F1 127 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 PRKCBP05771 671 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 KRT18P05783 430 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 FGFR1P11362 822 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 ATF7P17544 494 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 ARF4P18085 180 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 POU3F3P20264 500 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 BMPR1AP36894 532 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 STAT6P42226 847 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 PRPF4BQ13523 1007 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 PAN2Q504Q3 1202 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 SLC27A1Q6PCB7 646 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 GLB1LQ6UWU2 654 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 C17orf80Q9BSJ5 609 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 MRPL9Q9BYD2 267 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 AAASQ9NRG9 546 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 LMCD1Q9NZU5 365 aa16.31■□□□□ 0.2
TMEM39A-205ENST00000468676 TCHHQ07283 1943 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 CARNS1A5YM72 827 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 N4BP3O15049 544 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 ABCD1P33897 745 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 CTNNB1P35222 781 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 UBXN11Q5T124 520 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 LRRC43Q8N309 656 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 CPB2Q96IY4 423 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 CASD1Q96PB1 797 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 PYM1Q9BRP8 204 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 RNF19AQ9NV58 838 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 ARHGAP28Q9P2N2 729 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-205ENST00000468676 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 H3BNC9 293 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 B4GALT5O43286 388 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 FAM13AO94988 1023 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 IGFBP4P22692 258 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 GATMP50440 423 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 GIT2Q14161 759 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 CLLU1OSQ5K130 101 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 SPOUT1Q5T280 376 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 IQUBQ8NA54 791 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 KCNN1Q92952 543 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 P2RX5Q93086 422 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 ADPGKQ9BRR6 497 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 KIFC3Q9BVG8 833 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 KANSL3Q9P2N6 904 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
TMEM39A-205ENST00000468676 COL6A3P12111 3177 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms