RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 UBXN2AP68543 259 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 SMAD4Q13485 552 aaKnown RBP5.3□□□□□ -1.56
SSR3-204ENST00000467733 SURF1Q15526 300 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 TTLL5Q6EMB2 1281 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 USP51Q70EK9 711 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
SSR3-204ENST00000467733 RAET1EQ8TD07 263 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 CDC5LQ99459 802 aaKnown RBP5.3□□□□□ -1.56
SSR3-204ENST00000467733 BABAM1Q9NWV8 329 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 WHRNQ9P202 907 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 INVSQ9Y283 1065 aa5.3□□□□□ -1.56
SSR3-204ENST00000467733 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 ADGRA2Q96PE1 1338 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 AK9Q5TCS8 1911 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 CLRN2A0PK11 232 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 MROH6A6NGR9 719 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 OVOL3O00110 214 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 AURKAO14965 403 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 MYO1BO43795 1136 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 PDE8AO60658 829 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 TP53P04637 393 aaPredicted RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 PCCAP05165 728 aaPredicted RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 SSBP05455 408 aaKnown RBP eCLIP5.29□□□□□ -1.56
SSR3-204ENST00000467733 CETPP11597 493 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 HOXD10P28358 340 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 CTGFP29279 349 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 GIPRP48546 466 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 SEPHS1P49903 392 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 CCT4P50991 539 aaKnown RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 TNFAIP1Q13829 316 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 CNGB1Q14028 1251 aaPredicted RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 VGLL4Q14135 290 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 ETV3LQ6ZN32 361 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 TDHQ8IZJ6 230 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 C19orf47Q8N9M1 422 aaKnown RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 KYQ8NBH2 561 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 CDK5RAP1Q96SZ6 601 aaKnown RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 MTA3Q9BTC8 594 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 C11orf84Q9BUA3 381 aaPredicted RBP5.29□□□□□ -1.56
SSR3-204ENST00000467733 VEZTQ9HBM0 779 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.29□□□□□ -1.564e-10■■■■■ 27.8
SSR3-204ENST00000467733 TSC22D4Q9Y3Q8 395 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 MAST2Q6P0Q8 1798 aa5.29□□□□□ -1.56
SSR3-204ENST00000467733 AOX1Q06278 1338 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 FAM205AQ6ZU69 1335 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 FRMPD3Q5JV73 1810 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 BTBD19C9JJ37 291 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 SGPL1O95470 568 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 C8BP07358 591 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 HOXB7P09629 217 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 ATF4P18848 351 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 PPP2R1AP30153 589 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 PSMC4P43686 418 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 ARID5AQ03989 594 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 RASA3Q14644 834 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 PPP2R5EQ16537 467 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 CFAP100Q494V2 611 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 C17orf99Q6UX52 265 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 UNC5AQ6ZN44 842 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 RUFY4Q6ZNE9 571 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 PLEKHH3Q7Z736 793 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 DCP2Q8IU60 420 aaKnown RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 CERS5Q8N5B7 392 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
SSR3-204ENST00000467733 SH3RF3Q8TEJ3 882 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 PLEKHF1Q96S99 279 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 GORASP1Q9BQQ3 440 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 SSBP3Q9BWW4 388 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 SCAND2PQ9GZW5 306 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 GBP3Q9H0R5 595 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 FAM86C1Q9NVL1 165 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 FBLN5Q9UBX5 448 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 ZNF214Q9UL59 606 aaPredicted RBP5.28□□□□□ -1.56
SSR3-204ENST00000467733 PCDHAC2Q9Y5I4 1007 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 BACE2Q9Y5Z0 518 aa5.28□□□□□ -1.56
SSR3-204ENST00000467733 LTBP2Q14767 1821 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 MAPK8IP3Q9UPT6 1336 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 STXBP3O00186 592 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 CBFA2T2O43439 604 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 KLRK1P26718 216 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 PLA2G5P39877 138 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 PRKCZQ05513 592 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 PPIL2Q13356 520 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 MYO9BQ13459 2157 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 SNAPC2Q13487 334 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 PPP2R5DQ14738 602 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 CRIP3Q6Q6R5 217 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 ZC3H18Q86VM9 953 aaKnown RBP5.27□□□□□ -1.57
SSR3-204ENST00000467733 ERO1BQ86YB8 467 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 CCDC191Q8NCU4 936 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 SHDQ96IW2 340 aa5.27□□□□□ -1.57
SSR3-204ENST00000467733 PAWRQ96IZ0 340 aaKnown RBP5.27□□□□□ -1.57
SSR3-204ENST00000467733 LCORQ96JN0 433 aaPredicted RBP5.27□□□□□ -1.57
SSR3-204ENST00000467733 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.27□□□□□ -1.574e-7■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms