RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ABLIM1O14639 778 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 N4BP3O15049 544 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 GPR32O75388 356 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 IQCF3P0C7M6 154 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 CYP2C9P11712 490 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 TMOD1P28289 359 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 CYP2J2P51589 502 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 EFNA5P52803 228 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
COL4A1-202ENST00000467182 AMHR2Q16671 573 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 VWA3BQ502W6 1294 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 SESTD1Q86VW0 696 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 CREBRFQ8IUR6 639 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 ANKRD20A12PQ8NF67 263 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 FBXL18Q96ME1 805 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 NLRP4Q96MN2 994 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
COL4A1-202ENST00000467182 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
COL4A1-202ENST00000467182 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL4A1-202ENST00000467182 UNC93B1Q9H1C4 597 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 ADAMTS10Q9H324 1103 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 PCIF1Q9H4Z3 704 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 AKT3Q9Y243 479 aa14.23□□□□□ -0.13
COL4A1-202ENST00000467182 PRKCBP05771 671 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 HSPA8P11142 646 aaKnown RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 GARTP22102 1010 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 PSMC2P35998 433 aaKnown RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 ACLYP53396 1101 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 STRN3Q13033 797 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 FAM187BQ17R55 369 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 FILIP1LQ4L180 1135 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 CEP135Q66GS9 1140 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 GDF6Q6KF10 455 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 TMC6Q7Z403 805 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 RNF180Q86T96 592 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 ZBTB8OSQ8IWT0 167 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 FAM186BQ8IYM0 893 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 XXYLT1Q8NBI6 393 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 PCSK9Q8NBP7 692 aaKnown RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 MAP7D2Q96T17 732 aa14.22□□□□□ -0.13
COL4A1-202ENST00000467182 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-202ENST00000467182 ITIH6Q6UXX5 1313 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 A0A1W2PQC6 194 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ACKR2O00590 384 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 MAPK13O15264 365 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 TPM3P06753 285 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ADRB2P07550 413 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 EPB41P11171 864 aaKnown RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 PROZP22891 400 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 PHKA2P46019 1235 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 LIG4P49917 911 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 MTFR1Q15390 333 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ZPBP2Q6X784 338 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ZNF410Q86VK4 478 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 SLC35C1Q96A29 364 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ZBTB45Q96K62 511 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ERGIC2Q96RQ1 377 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 PPP1R16BQ96T49 567 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ACO2Q99798 780 aaKnown RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 FAM49AQ9H0Q0 323 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 NDST4Q9H3R1 872 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 METTL14Q9HCE5 456 aaKnown RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 PTPRHQ9HD43 1115 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 IMPACTQ9P2X3 320 aa14.21□□□□□ -0.13
COL4A1-202ENST00000467182 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-202ENST00000467182 A0A0B4J269 797 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 MOXD2PA6NHM9 499 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 B4GALT5O43286 388 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 FAM189A1O60320 539 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 EXOC3O60645 756 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 CABYRO75952 493 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 GNAT1P11488 350 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 NLRP11P59045 1033 aaKnown RBP14.2□□□□□ -0.14
COL4A1-202ENST00000467182 UBXN1Q04323 297 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 MAPK6Q16659 721 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 C1orf220Q5T0J3 134 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 CRELD2Q6UXH1 353 aaPredicted RBP14.2□□□□□ -0.14
COL4A1-202ENST00000467182 CBWD2Q8IUF1 395 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 DRC7Q8IY82 874 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 WNT8BQ93098 351 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 SAAL1Q96ER3 474 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 BICD1Q96G01 975 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 MRPL4Q9BYD3 311 aaKnown RBP14.2□□□□□ -0.14
COL4A1-202ENST00000467182 PRMT7Q9NVM4 692 aaPredicted RBP14.2□□□□□ -0.14
COL4A1-202ENST00000467182 FRMD4BQ9Y2L6 1034 aa14.2□□□□□ -0.14
COL4A1-202ENST00000467182 CNTNAP2Q9UHC6 1331 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 GOLGA8IPA6NC78 632 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 GOLGA8JA6NMD2 632 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms