RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ERLIN2O94905 339 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 KIF20AO95235 890 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 GCNT3O95395 438 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 PIGRP01833 764 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 PRKCBP05771 671 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 PPP1R2P41236 205 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 CASP5P51878 434 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 STRN3Q13033 797 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 STK4Q13043 487 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.262e-11■■□□□ 13.2
NPHP4-205ENST00000466897 MORC3Q14149 939 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
NPHP4-205ENST00000466897 ZPBP2Q6X784 338 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 RPUSD2Q8IZ73 545 aaKnown RBP16.7■□□□□ 0.26
NPHP4-205ENST00000466897 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 ERCC4Q92889 916 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-205ENST00000466897 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 FTHL17Q9BXU8 183 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 MRPL4Q9BYD3 311 aaKnown RBP16.7■□□□□ 0.26
NPHP4-205ENST00000466897 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 PADI3Q9ULW8 664 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
NPHP4-205ENST00000466897 TSPAN1O60635 241 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 MYBP10242 640 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CSF2RAP15509 400 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CD52P31358 61 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 FPGSQ05932 587 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 NCBP1Q09161 790 aaKnown RBP16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CNKSR3Q6P9H4 555 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 SEPT8Q92599 483 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 BADQ92934 168 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 HPS3Q969F9 1004 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 VWCEQ96DN2 955 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 ACCSQ96QU6 501 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 OSBPL7Q9BZF2 842 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 TMEM206Q9H813 350 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 IL23AQ9NPF7 189 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
NPHP4-205ENST00000466897 CSDE1O75534 798 aaKnown RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 PRPF4BQ13523 1007 aaKnown RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 PRPF38BQ5VTL8 546 aaKnown RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
NPHP4-205ENST00000466897 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-205ENST00000466897 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
NPHP4-205ENST00000466897 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 PTPRSQ13332 1948 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 A0A1B0GUA9 196 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 EFCAB14O75071 495 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 EDN1P05305 212 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 SYN1P17600 705 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 ARF4P18085 180 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 PROZP22891 400 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 SNRPFP62306 86 aaKnown RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 DSC3Q14574 896 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 MYOCDQ8IZQ8 938 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 DBF4BQ8NFT6 615 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 CGNQ9P2M7 1197 aaKnown RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-205ENST00000466897 TNFSF13BQ9Y275 285 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 GDAQ9Y2T3 454 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 CITO14578 2027 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 TTC3P53804 2025 aa16.67■□□□□ 0.26
NPHP4-205ENST00000466897 ZMYM2Q9UBW7 1377 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 N4BP3O15049 544 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 B4GALT5O43286 388 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 TOM1L1O75674 476 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 BMP6P22004 513 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 FGFR4P22455 802 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 KNOP1Q1ED39 458 aaKnown RBP16.66■□□□□ 0.26
NPHP4-205ENST00000466897 ATF7IP2Q5U623 682 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 PSRC1Q6PGN9 363 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-205ENST00000466897 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-205ENST00000466897 TMEM174Q8WUU8 243 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 TSPYL2Q9H2G4 693 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-205ENST00000466897 PTPRHQ9HD43 1115 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
NPHP4-205ENST00000466897 STYXL1Q9Y6J8 313 aa16.66■□□□□ 0.26
NPHP4-205ENST00000466897 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
NPHP4-205ENST00000466897 HNRNPDLO14979 420 aaKnown RBP16.65■□□□□ 0.26
NPHP4-205ENST00000466897 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
NPHP4-205ENST00000466897 ACTN1P12814 892 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms