RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-205	ENST00000466416	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.43	□□□□□ -0.74
ABCF3-205	ENST00000466416	LY9	Q9HBG7	655 aa		10.43	□□□□□ -0.74
ABCF3-205	ENST00000466416	DIAPH3	Q9NSV4	1193 aa		10.43	□□□□□ -0.74
ABCF3-205	ENST00000466416	CDH7	Q9ULB5	785 aa		10.43	□□□□□ -0.74
ABCF3-205	ENST00000466416	MIA3	Q5JRA6	1907 aa		10.43	□□□□□ -0.74
ABCF3-205	ENST00000466416	LAMA4	Q16363	1823 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	SOBP	A7XYQ1	873 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	NRP1	O14786	923 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	DHX15	O43143	795 aa	Known RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	CD72	P21854	359 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	KCNA4	P22459	653 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	SFPQ	P23246	707 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	TARS	P26639	723 aa	Known RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZNF76	P36508	570 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	GLUD2	P49448	558 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	LIMK1	P53667	647 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	ADCY1	Q08828	1119 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	LPAL2	Q16609	132 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZNF852	Q6ZMS4	543 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	GPR65	Q8IYL9	337 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	LRRC71	Q8N4P6	559 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZNF668	Q96K58	619 aa	Predicted RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	IER2	Q9BTL4	223 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	INO80B	Q9C086	356 aa	Predicted RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	NRBP2	Q9NSY0	501 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	FAM105A	Q9NUU6	356 aa		10.42	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZFYVE26	Q68DK2	2539 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	B4GALT3	O60512	393 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	DDAH1	O94760	285 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	DDHD2	O94830	711 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	PSAP	P07602	524 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	SPATA31D3	P0C874	917 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	MYB	P10242	640 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	TDGF1	P13385	188 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	DSG1	Q02413	1049 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	MTAP	Q13126	283 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	FZD5	Q13467	585 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	LONRF3	Q496Y0	759 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	LILRA6	Q6PI73	481 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	PRR23B	Q6ZRT6	265 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	SPATA31D4	Q6ZUB0	917 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	TAS1R1	Q7RTX1	841 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	RALYL	Q86SE5	291 aa	Known RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	PALB2	Q86YC2	1186 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	SRBD1	Q8N5C6	995 aa	Known RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	IGDCC4	Q8TDY8	1250 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	TBC1D22B	Q9NU19	505 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	PCDHA10	Q9Y5I2	948 aa		10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416		U3KPZ7	1027 aa	Predicted RBP	10.41	□□□□□ -0.74
ABCF3-205	ENST00000466416	PATJ	Q8NI35	1801 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	CNTNAP2	Q9UHC6	1331 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	MEIS3P2	A8K0S8	358 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	IPO5	O00410	1097 aa	Known RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	TM4SF5	O14894	197 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	TGM5	O43548	720 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	GDF9	O60383	454 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	CSDE1	O75534	798 aa	Known RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZMYND10	O75800	440 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	EFEMP2	O95967	443 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	CNR2	P34972	360 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	SIM2	Q14190	667 aa	Predicted RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	TPRG1	Q6ZUI0	275 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	MRPL10	Q7Z7H8	261 aa	Known RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	PLA2G4D	Q86XP0	818 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	RNF168	Q8IYW5	571 aa	Predicted RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZNF654	Q8IZM8	581 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	KDF1	Q8NAX2	398 aa	Predicted RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	NCOA7	Q8NI08	942 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	PHF20	Q9BVI0	1012 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	RIC8A	Q9NPQ8	531 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	CHST7	Q9NS84	486 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	FNIP2	Q9P278	1114 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	GABBR1	Q9UBS5	961 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	TCEAL9	Q9UHQ7	104 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	ZMIZ1	Q9ULJ6	1067 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	PIN4	Q9Y237	131 aa	Known RBP	10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	CEP295	Q9C0D2	2601 aa		10.4	□□□□□ -0.74
ABCF3-205	ENST00000466416	MAN2B1	O00754	1011 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	PLEKHA8P1	O95397	391 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	SREBF1	P36956	1147 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	CCR3	P51677	355 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	CREM	Q03060	361 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	AGMO	Q6ZNB7	445 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	ZNF410	Q86VK4	478 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	TMTC2	Q8N394	836 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	FGF13	Q92913	245 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	ANO3	Q9BYT9	981 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	CHRD	Q9H2X0	955 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	RSAD1	Q9HA92	442 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	MARCH5	Q9NX47	278 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	PCDHB2	Q9Y5E7	798 aa		10.39	□□□□□ -0.75
ABCF3-205	ENST00000466416	GTF3C3	Q9Y5Q9	886 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms