RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 TIPINQ9BVW5 301 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 CCDC113Q9H0I3 377 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 PRMT7Q9NVM4 692 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-206ENST00000465877 KCND2Q9NZV8 630 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 PCDHB2Q9Y5E7 798 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 ZNF623O75123 536 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 YEATS4O95619 227 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 EDN1P05305 212 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 PRKCBP05771 671 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 RB1P06400 928 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 BMPR1AP36894 532 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 TXLNAP40222 546 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 RAD51AP2Q09MP3 1159 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 DMP1Q13316 513 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 BECN1Q14457 450 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 FAM187BQ17R55 369 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 FOXD4L6Q3SYB3 417 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 LONRF3Q496Y0 759 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 FOXD4L3Q6VB84 417 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 LINC00301Q8NCQ3 95 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 LARP4BQ92615 738 aaKnown RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 RAD54LQ92698 747 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 PLVAPQ9BX97 442 aa14.25□□□□□ -0.13
COL5A1-206ENST00000465877 EIF2AQ9BY44 585 aaKnown RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 MRPL9Q9BYD2 267 aaKnown RBP14.25□□□□□ -0.13
COL5A1-206ENST00000465877 PPP6R2O75170 966 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 LAG3P18627 525 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 NPTX2P47972 431 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 PEX3P56589 373 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 NCBP1Q09161 790 aaKnown RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 MAPK6Q16659 721 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 GLB1LQ6UWU2 654 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 AGMOQ6ZNB7 445 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 GPBP1Q86WP2 473 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 CDR2LQ86X02 465 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 RSPH1Q8WYR4 309 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 P2RX5Q93086 422 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 PGBD4Q96DM1 585 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 MRPL38Q96DV4 380 aaKnown RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 TRIM6Q9C030 488 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 FZD8Q9H461 694 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 CWH43Q9H720 699 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
COL5A1-206ENST00000465877 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 IPPQ9Y573 584 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
COL5A1-206ENST00000465877 A0A0C4DFX4 3053 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 SPTLC2O15270 562 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 LIG1P18858 919 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 EFNA5P52803 228 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 PTPROQ16827 1216 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 TMEM132AQ24JP5 1023 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 TIGD5Q53EQ6 642 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 SLC27A1Q6PCB7 646 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 COLGALT1Q8NBJ5 622 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 SMG8Q8ND04 991 aaKnown RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 LMAN2LQ9H0V9 348 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 NXF3Q9H4D5 531 aaKnown RBP14.23□□□□□ -0.13
COL5A1-206ENST00000465877 PDZD7Q9H5P4 517 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 RSAD1Q9HA92 442 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 C17orf75Q9HAS0 396 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 ARHGAP28Q9P2N2 729 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 STK17AQ9UEE5 414 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 ODF2LQ9ULJ1 636 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 INPP5FQ9Y2H2 1132 aa14.23□□□□□ -0.13
COL5A1-206ENST00000465877 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 NPHP3-ACAD11A0A0J9YXS1 232 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 A0A1B0GUA9 196 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 CCDC169A6NNP5 214 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 ACKR2O00590 384 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 N4BP3O15049 544 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 GRM6O15303 877 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 CSPG5O95196 566 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 NPTXRO95502 500 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 BRD1O95696 1058 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 ITGB1P05556 798 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 MCM6Q14566 821 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 ARSHQ5FYA8 562 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms