RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 NCKAP1LP55160 1127 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 DEFB103AP81534 67 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 LONRF3Q496Y0 759 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 HABP4Q5JVS0 413 aaKnown RBP18.67■□□□□ 0.58
USP39-211ENST00000465282 NPAS4Q8IUM7 802 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 FAM178BQ8IXR5 827 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 TMEM161BQ8NDZ6 487 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 LINC01599Q8WXQ3 324 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 RSPH1Q8WYR4 309 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 ST6GALNAC4Q9H4F1 302 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 SERTAD1Q9UHV2 236 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 ADGRA3Q8IWK6 1321 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 A0A1B0GUA9 196 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 ZNF623O75123 536 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 ZNF202O95125 648 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 PRKCBP05771 671 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
USP39-211ENST00000465282 FAM160A1Q05DH4 1040 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 PRPF4BQ13523 1007 aaKnown RBP18.66■□□□□ 0.58
USP39-211ENST00000465282 RAB30Q15771 203 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 TWF2Q6IBS0 349 aaKnown RBP18.66■□□□□ 0.58
USP39-211ENST00000465282 CRIPAKQ8N1N5 446 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 CNNM3Q8NE01 707 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 ZHX3Q9H4I2 956 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 OLFML3Q9NRN5 406 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 TMEM161AQ9NX61 479 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 INSL6Q9Y581 213 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 PCDHA11Q9Y5I1 949 aa18.66■□□□□ 0.58
USP39-211ENST00000465282 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 SLC16A4O15374 487 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 IDEP14735 1019 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 ARF4P18085 180 aaPredicted RBP18.65■□□□□ 0.58
USP39-211ENST00000465282 UBE2HP62256 183 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 STRN3Q13033 797 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 HAUS6Q7Z4H7 955 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 APBB1IPQ7Z5R6 666 aaPredicted RBP18.65■□□□□ 0.58
USP39-211ENST00000465282 FMR1NBQ8N0W7 255 aaPredicted RBP18.65■□□□□ 0.58
USP39-211ENST00000465282 STAMQ92783 540 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 PAGE5Q96GU1 130 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 RAD9AQ99638 391 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 KIFC3Q9BVG8 833 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 GOLPH3LQ9H4A5 285 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 PANK4Q9NVE7 773 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 LRFN2Q9ULH4 789 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 PCDHB7Q9Y5E2 793 aa18.65■□□□□ 0.58
USP39-211ENST00000465282 N4BP3O15049 544 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 HOXA2O43364 376 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 HTRA4P83105 476 aaPredicted RBP18.64■□□□□ 0.57
USP39-211ENST00000465282 ALCAMQ13740 583 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 HERC4Q5GLZ8 1057 aaPredicted RBP18.64■□□□□ 0.57
USP39-211ENST00000465282 GPR153Q6NV75 609 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 SLC27A1Q6PCB7 646 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 ECHDC2Q86YB7 292 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 ENGASEQ8NFI3 743 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 HVCN1Q96D96 273 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 TIGD1Q96MW7 591 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 MRPL4Q9BYD3 311 aaKnown RBP18.64■□□□□ 0.57
USP39-211ENST00000465282 FAM105AQ9NUU6 356 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 MSRAQ9UJ68 235 aa18.64■□□□□ 0.57
USP39-211ENST00000465282 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 TLL1O43897 1013 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 AFMP43652 599 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 ASIC1P78348 528 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 GTF2BQ00403 316 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
USP39-211ENST00000465282 ZPBP2Q6X784 338 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 STXBP4Q6ZWJ1 553 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 UNC13DQ70J99 1090 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 ZNF720Q7Z2F6 126 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
USP39-211ENST00000465282 HACE1Q8IYU2 909 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 PGBD4Q96DM1 585 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 ADPGKQ9BRR6 497 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 MRPL44Q9H9J2 332 aaKnown RBP18.63■□□□□ 0.57
USP39-211ENST00000465282 HOOK1Q9UJC3 728 aaKnown RBP18.63■□□□□ 0.57
USP39-211ENST00000465282 PCDHB13Q9Y5F0 798 aa18.63■□□□□ 0.57
USP39-211ENST00000465282 FNDC1Q4ZHG4 1894 aaPredicted RBP18.63■□□□□ 0.57
USP39-211ENST00000465282 TMEM265A0A087WTH1 108 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 K7ENM7 598 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 B4GALT5O43286 388 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
USP39-211ENST00000465282 DGKIO75912 1065 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 UPP2O95045 317 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 FAM109BQ6ICB4 259 aaPredicted RBP18.62■□□□□ 0.57
USP39-211ENST00000465282 MRPL10Q7Z7H8 261 aaKnown RBP18.62■□□□□ 0.57
USP39-211ENST00000465282 CPB2Q96IY4 423 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 PBX4Q9BYU1 374 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 UBN1Q9NPG3 1134 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 TBX20Q9UMR3 447 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 TNFSF13BQ9Y275 285 aa18.62■□□□□ 0.57
USP39-211ENST00000465282 PCDHB2Q9Y5E7 798 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms