RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	WDR5	P61964	334 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	LAMTOR4	Q0VGL1	99 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	PAK2	Q13177	524 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	L1TD1	Q5T7N2	865 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	GPR153	Q6NV75	609 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZNF720	Q7Z2F6	126 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	NELFCD	Q8IXH7	590 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	FAM178B	Q8IXR5	827 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	ADSSL1	Q8N142	457 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	MLKL	Q8NB16	471 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	SCFD1	Q8WVM8	642 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	TCP11	Q8WWU5	503 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	NLRP7	Q8WX94	980 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	IFT74	Q96LB3	600 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	OSMR	Q99650	979 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	RBSN	Q9H1K0	784 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	AGO3	Q9H9G7	860 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	CDHR5	Q9HBB8	845 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	KMT5A	Q9NQR1	393 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	LARS	Q9P2J5	1176 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	SEL1L	Q9UBV2	794 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	MSRA	Q9UJ68	235 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	TRIP12	Q14669	1992 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	GRXCR1	A8MXD5	290 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870		K7ENM7	598 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	ASAP2	O43150	1006 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	SRGAP2C	P0DJJ0	459 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	GPC3	P51654	580 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	KCNA1	Q09470	495 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	NFX1	Q12986	1120 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	DMP1	Q13316	513 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	CAPS	Q13938	189 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	RAB30	Q15771	203 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	TCTN1	Q2MV58	587 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	RHPN2	Q8IUC4	686 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	MYOCD	Q8IZQ8	938 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	RNF214	Q8ND24	703 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	SPIRE2	Q8WWL2	714 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	PSPC1	Q8WXF1	523 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	MED15	Q96RN5	788 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZBED2	Q9BTP6	218 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	FTHL17	Q9BXU8	183 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	IKZF4	Q9H2S9	585 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	ADAMTS10	Q9H324	1103 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	CBX8	Q9HC52	389 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	OLFML3	Q9NRN5	406 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	PADI3	Q9ULW8	664 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	CTNND2	Q9UQB3	1225 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	ADGRA3	Q8IWK6	1321 aa		13.55	□□□□□ -0.24
PTPN7-205	ENST00000464870	MYH11	P35749	1972 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	LRRIQ4	A6NIV6	560 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	MAPT	P10636	758 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	EIF4B	P23588	611 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	HOXD13	P35453	343 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZNF165	P49910	485 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	PMS1	P54277	932 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	NCKAP1L	P55160	1127 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	HAUS6	Q7Z4H7	955 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZNF410	Q86VK4	478 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	HERC6	Q8IVU3	1022 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	RNF149	Q8NC42	400 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	TMEM161B	Q8NDZ6	487 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZNF507	Q8TCN5	953 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	NELFB	Q8WX92	580 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	NLRP4	Q96MN2	994 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	STRA6	Q9BX79	667 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	INO80B	Q9C086	356 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	SEMA6B	Q9H3T3	888 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	C17orf75	Q9HAS0	396 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	ST3GAL5	Q9UNP4	418 aa		13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870	NOC2L	Q9Y3T9	749 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-205	ENST00000464870		A0A087WZ62	844 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	DENND3	A2RUS2	1198 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	TRIM49B	A6NDI0	452 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	ENPP3	O14638	875 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	PPP1R37	O75864	691 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	DARS	P14868	501 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	DNAJB2	P25686	324 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	NAMPT	P43490	491 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	SMTN	P53814	917 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	DEFB103A	P81534	67 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	STIM1	Q13586	685 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	MXD4	Q14582	209 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	PPP2R5A	Q15172	486 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	COBLL1	Q53SF7	1204 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	TAS1R3	Q7RTX0	852 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	GUF1	Q8N442	669 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	AOPEP	Q8N6M6	819 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	DEPTOR	Q8TB45	409 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	TMEM40	Q8WWA1	233 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	TIFA	Q96CG3	184 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	NTPCR	Q9BSD7	190 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	PBX4	Q9BYU1	374 aa		13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	GTPBP4	Q9BZE4	634 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-205	ENST00000464870	ERVK-5	Q9HDB9	667 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms