RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MTCH2Q9Y6C9 303 aa18.82■□□□□ 0.6
VPS52-215ENST00000464425 COL4A6Q14031 1691 aa18.82■□□□□ 0.6
VPS52-215ENST00000464425 CCDC169A6NNP5 214 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 MEIS3P2A8K0S8 358 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 HOXA2O43364 376 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 GTPBP6O43824 516 aaPredicted RBP18.81■□□□□ 0.6
VPS52-215ENST00000464425 SKIP12755 728 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 ARF4P18085 180 aaPredicted RBP18.81■□□□□ 0.6
VPS52-215ENST00000464425 AXLP30530 894 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 PEX3P56589 373 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 GPM6BQ13491 265 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 MCM6Q14566 821 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 NOTUMQ6P988 496 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 CDR2LQ86X02 465 aaPredicted RBP18.81■□□□□ 0.6
VPS52-215ENST00000464425 HELQQ8TDG4 1101 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 RAD54LQ92698 747 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 DRC1Q96MC2 740 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 C2orf40Q9H1Z8 148 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 BLOC1S4Q9NUP1 217 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
VPS52-215ENST00000464425 CCDC39Q9UFE4 941 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 USP20Q9Y2K6 914 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 RWDD3Q9Y3V2 267 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 EYSQ5T1H1 3165 aa18.81■□□□□ 0.6
VPS52-215ENST00000464425 CUTAO60888 179 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 ZNF623O75123 536 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 NPTX2P47972 431 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 RAB27AP51159 221 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
VPS52-215ENST00000464425 MAPK7Q13164 816 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 MAPK6Q16659 721 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 LRRC55Q6ZSA7 311 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 CHAMP1Q96JM3 812 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
VPS52-215ENST00000464425 FZD8Q9H461 694 aa18.8■□□□□ 0.6
VPS52-215ENST00000464425 PRMT7Q9NVM4 692 aaPredicted RBP18.8■□□□□ 0.6
VPS52-215ENST00000464425 PRRC2BQ5JSZ5 2229 aaKnown RBP18.8■□□□□ 0.6
VPS52-215ENST00000464425 TTLL13PA6NNM8 815 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 H3BNC9 293 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 PRKCBP05771 671 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 RB1P06400 928 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 POU3F3P20264 500 aaPredicted RBP18.79■□□□□ 0.6
VPS52-215ENST00000464425 TXLNAP40222 546 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 ME1P48163 572 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 DMP1Q13316 513 aaPredicted RBP18.79■□□□□ 0.6
VPS52-215ENST00000464425 TMEM132AQ24JP5 1023 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
VPS52-215ENST00000464425 RRAGBQ5VZM2 374 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 PGBD4Q96DM1 585 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 TIPINQ9BVW5 301 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 CCDC113Q9H0I3 377 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 PCDHA7Q9UN72 937 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 INPP5FQ9Y2H2 1132 aa18.79■□□□□ 0.6
VPS52-215ENST00000464425 A0A1B0GUA9 196 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 C5orf67F2Z3F1 127 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 EFNA5P52803 228 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 PRPF4BQ13523 1007 aaKnown RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 FAM187BQ17R55 369 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 CLEC17AQ6ZS10 378 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 MRPL10Q7Z7H8 261 aaKnown RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 SMG8Q8ND04 991 aaKnown RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 CCDC51Q96ER9 411 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 C11orf84Q9BUA3 381 aaPredicted RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 TRIM6Q9C030 488 aaPredicted RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 CWH43Q9H720 699 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 ALG13Q9NP73 1137 aaKnown RBP18.78■□□□□ 0.6
VPS52-215ENST00000464425 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 KCND2Q9NZV8 630 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 HES2Q9Y543 173 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 IPPQ9Y573 584 aa18.78■□□□□ 0.6
VPS52-215ENST00000464425 FNDC1Q4ZHG4 1894 aaPredicted RBP18.77■□□□□ 0.6
VPS52-215ENST00000464425 K7ERI5 159 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 ACKR2O00590 384 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 GRM6O15303 877 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 SLC16A4O15374 487 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 OFD1O75665 1012 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 CSPG5O95196 566 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 NPTXRO95502 500 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 EDN1P05305 212 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 KRT18P05783 430 aaKnown RBP18.77■□□□□ 0.6
VPS52-215ENST00000464425 PLS3P13797 630 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 ADALQ6DHV7 355 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 GLB1LQ6UWU2 654 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 AGMOQ6ZNB7 445 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 KLHL23Q8NBE8 558 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
VPS52-215ENST00000464425 PRIMPOLQ96LW4 560 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 REEP2Q9BRK0 252 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 APOL6Q9BWW8 343 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 PLVAPQ9BX97 442 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 C17orf75Q9HAS0 396 aa18.77■□□□□ 0.6
VPS52-215ENST00000464425 CNTNAP2Q9UHC6 1331 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 PRUNE2Q8WUY3 3088 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms